KEGG   Synechococcus sp. KORDI-100: KR100_02260
Entry
KR100_02260       CDS       T03344                                 
Name
(GenBank) peptidase C39
  KO
K11004  ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
synk  Synechococcus sp. KORDI-100
Pathway
synk02010  ABC transporters
synk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:synk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    KR100_02260
   03070 Bacterial secretion system
    KR100_02260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:synk02000]
    KR100_02260
   02044 Secretion system [BR:synk02044]
    KR100_02260
Transporters [BR:synk02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    KR100_02260
Secretion system [BR:synk02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   KR100_02260
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N cNMP_binding AAA_22 AAA_21 AAA_16 AAA_29 DUF87 Peptidase_C39 Zeta_toxin AAA_30 nSTAND1 RsgA_GTPase AAA_23
Other DBs
NCBI-ProteinID: AII42227
UniProt: A0A076H021
Position
453402..456356
AA seq 984 aa
MTTSPPFPLLKHPAFKGLSDAGASRLRQGTKVLRFELGQQLVEPDDIPARVLVVLQGQAR
LVGRHNGRLTTVGKFGPGSVLGAASLLMGQPCENIVASQEVVACSISDELWSDLYSSETA
FQTWCNRQIWPQELLQLLEILAERSASVEDTALELLEDGLKLSKRCAAEAAAIDAALAEG
QRLFLSSHWGADEIGKAVHSISDLESSGRFRPRLVGLPEDFEQRLSQTLAPADQETDGDS
IGGDLIPFEDSEAGETLPPVSRYSPERNVVDSLRLIRADGPLQETLACFQMLAQLMKLPF
RRDSIEKVLQDNLRRGLTPNLQLCGQLAASLGLHVMAARVPAAAGTRLQVPSLVPWNNGF
ALVVASHEGALKLASPKHGMVTLLPDDLEENFPEGIELLLMERSNATPDQKFGPGWFWPA
LKRYRGVLIQVLAASFVVQLFTLANPLLIQVIIDKVISQRSLDTLQVLGIALVVVTILEG
VLGSLKTFLFAETTNRIDQRLGAEVIDHLLRLPLGYFDRRPVGELGTRVAELEKIRNFLT
GQALTTILDAAFSLIYIAVMVVYSWLLTLIALSVLPIQIGLTLLGAPLFRRQFRAAAEEN
AKTQSHLVEVLTGIQTVKAQNVEMVSRWRWQEFYSQYIARTFEKTITGTALNQTSQVLQK
ISQLMVLWIGASMVLSGDLTLGQLIAFRIISGYVTQPLLRLSTIWQNIQELRVSFERLAD
VIDTPEESDEVDKSKVMLPPLQGQVRFEDLSFRFRPGQPEVLKDVNLEVPSGTFVGIVGQ
SGSGKSTLMKLLPRLYDPGEGRILIDGYDIGKVELYSLRRQIGIVPQDPLLFSGTVSENI
ALTNPEASSEEIVRAARLANAHDFIMDLTSGYSTPVGERGAALSGGQRQRVAIARTLLSN
PKLLVMDEATSALDYETERKVCDNLLENLNDRTVFFITHRLSTIRNADMIVMLDKGAIVE
VGTHDDLMNHRGRYYALYRQQGDA
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgacgacgtcacctccgtttcccctgctcaagcatccggccttcaagggtctgagtgat
gccggtgcatcacgcttgcgccagggcaccaaggtgctacggtttgaactcgggcagcaa
ctggttgagccggacgacatcccagccagggtgttggtggtgcttcagggccaggcacgc
cttgtcggacgccacaacggtcggctgaccaccgtcggcaaattcggccccggcagtgtt
ctgggagcggccagcctcttgatggggcaaccctgtgaaaacatcgtcgcttcccaggag
gtggtggcctgttccatcagtgatgagctctggagtgatctgtacagctcggaaacggcc
ttccagacgtggtgtaatcgtcagatctggccccaggaactgctgcagctcctggagatt
ctcgccgaacgttccgccagtgttgaggacacggcgcttgagctgcttgaggatggtctg
aaactgtccaagcgttgtgcggcggaggctgctgcgatcgatgcggccctcgccgagggg
cagcggctctttctctcctcccactggggtgctgatgagatcggcaaggctgtccattcc
atcagtgaccttgaatccagcgggcgcttccgtccacgtcttgtcgggttgcccgaagac
tttgagcaacgcctgtcgcagacgctcgctcctgccgatcaggagacggacggggacagc
atcggtggtgacctgattcctttcgaggattccgaggcgggagaaacgctgcctccggtc
agtcgctatagcccggaacgcaatgtggtcgacagcctgcgcttgattcgcgcggatggg
cccctgcaggagaccctggcctgtttccagatgctggcgcagctgatgaagctgccattc
cggcgggattcgatcgaaaaggttctccaggacaacctgcgccgaggactgactcccaac
cttcagctttgcggccagctggcggccagccttgggctgcacgtgatggctgcgcgggtg
cccgctgctgccggaacacgcctccaggttccatcgctggtgccctggaacaacggattc
gctctcgtggtggctagccatgaaggggctctgaagctggcctccccgaagcatgggatg
gtcacgctgctaccggacgacctcgaggagaacttccctgaagggatcgaattgctcttg
atggagcgatccaatgcaacaccggatcagaagttcgggcccggctggttctggccggcg
ctgaagcgttaccggggtgtgctgatccaggtgttggcggccagttttgtcgtccagctg
ttcacgctggccaaccctctgctgattcaggtgatcatcgacaaggtgatcagccagcga
agcctcgacaccctacaggtgctcgggatcgctctcgtggtggtgacgatccttgaaggt
gtgctcggcagcctcaagacttttttgtttgcggaaaccacgaaccgtatcgatcagcgg
ttgggtgcggaagtgatcgatcatctgctgcgcctgccgctcggatacttcgatcgtcga
ccggtcggtgaactggggacccgtgtcgctgagcttgagaagatccgcaacttcctcaca
ggccaggctctcaccacgattctggatgccgccttttcgttgatctacatcgccgtgatg
gtggtctacagctggctgctgacgctgattgccctgtccgtgctgccgattcagatcggt
ctcacgctgctgggggcgccgttgttccgacggcagttccgggctgctgctgaagaaaac
gccaagacccagagccacctcgtggaggtgctcaccggcattcagacggtgaaggctcag
aacgtcgagatggtgagtcgttggcggtggcaggagttttattcccagtacatcgcccgc
accttcgaaaaaacgatcaccgggacggcgctgaaccagaccagtcaggttcttcagaag
atctcccagctgatggtgctctggatcggcgcctcgatggtgctcagcggtgatctgacc
ctcggccagttgatcgcattccggatcatctccggatacgtgacgcaaccactgctgagg
ttgtcgacgatctggcagaacatccaggagctgcgagtcagcttcgagcgcctcgccgat
gtgattgacacgcccgaggaatcggatgaggtcgacaagtcgaaggtgatgctgcctcct
ctgcaaggccaggttcgcttcgaagatctgtccttccgtttccgccccggtcagccggag
gttctcaaggatgtgaatctggaagtcccgtcaggaacctttgtcggcatcgtcggccag
agcggcagcggcaaaagcacgttgatgaaactcctgccgcgcctctatgaccctggcgag
gggcgcatcctcattgacggctacgacatcggcaaggtggagctctactcgctgcgccgt
cagatcgggatcgttccccaggatcccttgttgttcagcggcaccgtgagtgagaacatc
gctctgacgaatccagaggcgtccagcgaggagatcgtccgggcggcccgactggccaat
gcccacgacttcatcatggatctgacaagcggctacagcactccggtcggtgaacggggt
gctgctctgagtggcggtcagcgtcagcgggtcgccatcgccagaaccctgctgagcaat
ccgaaactgcttgtgatggatgaggcaacaagcgctctcgactacgaaaccgagcgcaag
gtctgcgacaacctgcttgaaaatctgaacgatcgcacggttttcttcatcacccaccgt
ctgtccaccatccgcaacgcagacatgatcgtgatgctcgacaagggcgccatcgtcgaa
gtcggcacccatgacgatctgatgaaccatcgcgggcgttactacgccctctatcgccaa
cagggggacgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system