KEGG   Synechococcus sp. WH 8103: SynWH8103_00075
Entry
SynWH8103_00075   CDS       T04859                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
synw  Synechococcus sp. WH 8103
Pathway
synw03030  DNA replication
synw03430  Mismatch repair
synw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:synw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SynWH8103_00075 (holA)
   03430 Mismatch repair
    SynWH8103_00075 (holA)
   03440 Homologous recombination
    SynWH8103_00075 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:synw03032]
    SynWH8103_00075 (holA)
   03400 DNA repair and recombination proteins [BR:synw03400]
    SynWH8103_00075 (holA)
Enzymes [BR:synw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SynWH8103_00075 (holA)
DNA replication proteins [BR:synw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SynWH8103_00075 (holA)
DNA repair and recombination proteins [BR:synw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SynWH8103_00075 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delta_C SpoVIF
Other DBs
NCBI-ProteinID: CRY90831
Position
complement(70243..71208)
AA seq 321 aa
MPIHLIWGDDAAARDRAINGLIEKVVDPSWASLNLSRLDGAEAGQAAQALDEARTPPFAS
CERLVLLQRSPFCNGCPTELADRFEAALTLIPDSSHLVLVNPSKPDGRLRTTKALQKRIK
AGLDQEQSFPLPAVWDGAGQRQLVQRTAEALGLRLEPDAIDALVDAIGTDSARLESELRK
LSLRSITISADLVAELVGGLATNALQVGDALLEGNPGDAIARWDALIEAGEPALRIVATL
SGQIRGWLWVSLMEQQGERDVAVIAKAAGIGNPKRIYVMRKQLQGRPPQRFLSLLGRLLE
VEARLKRGSQPGDAFRDGLLG
NT seq 966 nt   +upstreamnt  +downstreamnt
atgccgatccatctgatctggggtgatgacgccgccgcgcgggaccgggccatcaacggc
ctgatcgagaaagtggtggatcccagctgggccagcctcaacctcagccgcctcgatggt
gccgaggccggtcaggcggcccaggccctcgatgaggcccgaacgccgcccttcgcgagc
tgtgaacgcctggtgctgctgcagcgcagtcccttctgcaatggctgccccaccgagctg
gcggatcgcttcgaagccgcgctgacgctgatccccgacagcagccatctggtgctggtc
aatccctccaaacccgacggtcgccttcgcaccaccaaggcactgcagaagcgcatcaaa
gccggcctggaccaggagcagagtttcccgttaccggccgtgtgggatggcgccggccag
cggcagctggtgcagcgcactgccgaagcccttggcctccgcctggaaccggacgccatc
gatgccctagtggatgccatcggtaccgacagcgcccggctggagtcggaactgcgcaag
ctttccctgcggtcaataaccatcagcgccgacctggtggccgagctcgttgggggtctc
gccaccaatgccctgcaggtgggggatgccctgctggagggcaaccccggcgacgccatc
gcccgctgggatgccctgatcgaagccggtgaaccggccctgcgcatcgtggccaccctc
agcgggcagatccgcggctggctctgggtgagcctgatggagcagcagggcgaacgggat
gtggcggtgatcgccaaggccgctggcatcggcaaccccaaacggatctatgtgatgcgc
aagcagctgcagggccggccaccccagcgcttcctctccctgctggggcggctgctggag
gtggaagcccggctgaaacggggtagccagcccggtgatgccttccgtgatgggctgctg
gggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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