KEGG   Synechococcus sp. WH 8103: SynWH8103_00141
Entry
SynWH8103_00141   CDS       T04859                                 
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
synw  Synechococcus sp. WH 8103
Pathway
synw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:synw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SynWH8103_00141 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:synw03400]
    SynWH8103_00141 (ruvB)
Enzymes [BR:synw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SynWH8103_00141 (ruvB)
DNA repair and recombination proteins [BR:synw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     SynWH8103_00141 (ruvB)
    RecFOR pathway proteins
     SynWH8103_00141 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 Mg_chelatase AAA_14 AAA_25 AAA_22 AAA_16 TIP49 nSTAND3 TsaE AAA_33 DUF815 bpMoxR AAA_18 AAA_17 AAA_24 Rad17 NTPase_1 RNA_helicase IstB_IS21 AAA_28 NB-ARC
Other DBs
NCBI-ProteinID: CRY90894
Position
131129..132175
AA seq 348 aa
MAIVSSNAGSSAPRREPVLDAQPLPEESSGRPDDGLRPKRLDDYIGQDELKQVLGIAVQA
ALGRGDALDHVLLYGPPGLGKTTMALVLAEELGVTCRITSAPALERPRDIVGLLVNVQPR
DLLFIDEIHRLNRVAEELLYPAMEDRRLDLTVGKGSTARTRSLELPPFTLVGATTKAGSL
SSPLRDRFGLIQRLEFYGQEDLEAIVSRTADLLGVSLSAGACRRIAGCCRGTPRIANRLL
RRVRDVACVQGRQNQIDEGLVSQALSLHRVDHRGLDAGDRRLLAQLDQHHDGGPVGLETL
AAALGEDPTTLESVVEPFLLQQGLLVRTPRGRMLTEAARAHLREQEVA
NT seq 1047 nt   +upstreamnt  +downstreamnt
atggcgatcgtctcctccaacgcaggctcctctgcgccccgtcgtgagccggtgctcgat
gcgcagccgttgcccgaggaatcgagcgggcgtcccgacgatggtttgcgtcccaagcga
ctggacgactacataggccaggacgaactgaagcaggtgctgggaatcgccgttcaggcg
gccctcggccgtggtgacgccctggatcatgtgctgctttacggccctccaggtctcgga
aagaccaccatggccctggtgttggccgaagaacttggggtgacctgccgcatcaccagt
gctccggcccttgagcgtccccgggacatcgtgggtctcctggtcaatgtgcagccacgg
gatctgctgttcatcgacgagatccatcgcctcaaccgggtcgcggaggagctgctgtac
cccgcgatggaggatcgacggctggacctcaccgttggcaagggcagcacagcgcgcacc
cgctctcttgagttgccacccttcaccctggtgggggccaccaccaaggctggatcgctc
agttcaccgctgcgcgaccgtttcggcctgatccagcggcttgagttttacggccaggag
gatctggaggcgatcgtgtctcgaaccgctgatctgctcggagtgtccctctccgctggg
gcctgccgtcgcattgcgggctgttgccgcggcacgccgcggatcgccaaccgtctgttg
cgccgggtccgtgatgtggcctgtgttcaggggcgacagaaccagattgatgaaggtctg
gtgagccaggccctgagcctgcatcgggtcgaccatcgtggcctggatgccggtgatcga
cgtctactggcgcaactggatcagcaccatgatggtggacctgtaggccttgaaaccctg
gctgctgccctcggggaagatcccaccacgctggaatcggtggtggaaccctttctgctc
cagcaagggctactggtacgcacgccgcgaggccggatgctcaccgaagccgcccgcgcg
catctccgcgagcaggaggtggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (26)   
   Pfam (26)   
All databases (35)   

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