KEGG   Synechococcus sp. WH 8103: SynWH8103_00593
Entry
SynWH8103_00593   CDS       T04859                                 
Symbol
groL1
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
synw  Synechococcus sp. WH 8103
Pathway
synw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:synw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SynWH8103_00593 (groL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:synw03019]
    SynWH8103_00593 (groL1)
   03110 Chaperones and folding catalysts [BR:synw03110]
    SynWH8103_00593 (groL1)
   03029 Mitochondrial biogenesis [BR:synw03029]
    SynWH8103_00593 (groL1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:synw04147]
    SynWH8103_00593 (groL1)
Enzymes [BR:synw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     SynWH8103_00593 (groL1)
Messenger RNA biogenesis [BR:synw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SynWH8103_00593 (groL1)
Chaperones and folding catalysts [BR:synw03110]
 Heat shock proteins
  HSP60 / Chaperonin
   SynWH8103_00593 (groL1)
Mitochondrial biogenesis [BR:synw03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    SynWH8103_00593 (groL1)
Exosome [BR:synw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SynWH8103_00593 (groL1)
  Exosomal proteins of other body fluids (saliva and urine)
   SynWH8103_00593 (groL1)
  Exosomal proteins of breast cancer cells
   SynWH8103_00593 (groL1)
  Exosomal proteins of colorectal cancer cells
   SynWH8103_00593 (groL1)
  Exosomal proteins of bladder cancer cells
   SynWH8103_00593 (groL1)
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-ProteinID: CRY91336
Position
519084..520718
AA seq 544 aa
MAKRIIYNENARRALEKGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGID
KASDFLVSKIKEQAKPIADSNAIAQVGTISAGNDEEVGKMIADAMDKVGKEGVISLEEGK
SMETELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIGLVQDLVPVLEQIA
RTGKPLMIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLI
TEDAGLKLENAKLEMLGTARRVTINKDTTTIVAEGNEAAVGARCEQIKKQMDETDSTYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APSLEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISEGYNA
ATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGG
DFDY
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggctaagcgcatcatttacaacgagaacgcccgccgcgctctcgaaaaaggcatcgac
atcctggccgagtccgtggccgtgaccctgggaccaaagggccgcaacgtggtgctcgag
aaaaagttcggtgctcctcagatcattaatgacggtgtcaccatcgccaaggagatcgag
ctcgaggatcacatcgagaacaccggtgttgctctgatccgtcaggccgcctccaagacc
aacgacgctgccggtgacggcacaaccaccgccaccgtcctggcccacgccatggtcaag
gccggtctgcgcaacgtggccgccggtgccaacgccatcaccctgaagaaaggcatcgac
aaggcctccgacttcctggtcagcaagatcaaggagcaggccaagcccatcgccgacagc
aacgccatcgcccaggtgggcaccatctccgccggcaacgacgaagaagtcggcaagatg
atcgccgatgccatggacaaggttggcaaggaaggcgtgatttccctggaagagggcaag
tccatggagaccgaactagaggtcaccgagggcatgcgcttcgacaagggctacatctcc
ccgtatttcgccaccgacaccgagcggatggaagcggtgctcgacgagccctacatcctg
ctgaccgacaagaagatcggtctggtgcaggacctggtgcccgtgctcgagcagatcgcc
cgcaccggcaagcctctgatgatcatcgctgaggacatcgagaaggaagccctggccacc
ctggtggtgaaccgcctgcgcggtgtgctgaacgtggccgccgtcaaggctcctggcttc
ggtgaccgccgcaaggccatgctcgaagacatggctgtgctgaccaacggtcagctgatc
accgaggacgctggtctcaagctggagaacgccaagctggagatgttgggcaccgcccgt
cgcgtcaccatcaacaaggacaccaccaccatcgttgccgaaggcaatgaggcggctgtc
ggcgctcgctgcgagcagatcaagaagcagatggacgagaccgactccacctatgacaag
gagaagctgcaggagcgtctggccaagctggccggtggcgttgctgtggtgaaagtgggt
gcggccaccgaaaccgagatgaaggacaagaagcttcgtctcgaggacgccatcaacgcc
accaaggctgcggtggaagagggcatcgtccctggcggcggcaccaccctggcccacctg
gctccttcccttgaggagtgggccaacggcaacctgtccggtgaagagctgatcggcgcc
aacatcgtggctgctgccctgacggcaccgctgatgcgcatcgctgaaaacgctggtgcc
aacggcgctgttgtggctgagaacgtcaagtcccgcgccatcagcgagggctacaacgct
gccaccggcgattacgtcgacatgctggctgccggcatcgtcgatcccgccaaggtgact
cgctccggtctgcagaatgccgcctccatcgctggcatggtgctgaccaccgagtgcatc
gtggctgatctgcccgagaagaaggacgcagctcctgccggcggcggcatgggcggtggc
gacttcgactactga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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