KEGG T04859: SynWH8103

Synechococcus sp. WH 8103: SynWH8103_01383

Entry

SynWH8103_01383   CDS       T04859

Symbol

uvrC

Name

(GenBank) excinuclease UvrABC complex, endonuclease subunit

K03703

excinuclease ABC subunit C

Organism

synw Synechococcus sp. WH 8103

Pathway

synw03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:synw00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SynWH8103_01383 (uvrC)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:synw03400]
    SynWH8103_01383 (uvrC)
DNA repair and recombination proteins [BR:synw03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SynWH8103_01383 (uvrC)

SSDB

Motif

Pfam:

UvrC_RNaseH_dom HHH_5 HHH_2 GIY-YIG UVR HHH 5_3_exonuc

Other DBs

NCBI-ProteinID:

CRY92111

Position

complement(1209985..1211961)

AA seq 658 aa
MADSLTMPPLLTQPEVLERRLKEIPPEPGCYLMRDGEDRILYVGKSKSLRSRVRSYFRSR
HDLSPRIRLMTRQVCEIEFIVTDSEAEALALESNLIKNHQPHFNVLLKDDKKYPYLCITW
SEVYPRIFITRRRRFRSPLDRFYGPYVDVGLLRRTLFLVKRVFPLRQRPRPLHPDRTCLN
YSIGRCPGVCQEKITSEDYHRTLRKVAMVFQGRSDELQRLLDEQMNRYAERLDFESAARV
RDQLQGLDQLTADQKMSLPDSSVSRDVLALACDDRLAAVQLFQMRAGKLVGRLGYTADAS
ALAPGLILQRVIEEHYSQVDAVEVPPELLVQHALPQQQLLEDWLTEQRERKVQIHCPKQR
QKADLIELVQRNAEFELLRAKQGQEQQALATEDLAQLLEMPTPPRRIEGYDISHIQGSDA
VASQVVFIDGLPAKQHYRKYKIRSSSIQSGHSDDFMAMAEIMRRRFRRWARAKADGVDVG
ALRHKGGSALQTDGLNDWPDVVMIDGGKGQLSAVMEALRELDLHEDLNVCSLAKQREEVF
LPGESQPLESEPDQLGVALLRRLRDEAHRFAVSFHRQQRGERMKRSRLSDIPGVGPKRVK
DLLAHFHSIDAIQMASVDVLSKAPGVGTALARDIHGFFHPAEEAGQDVCSEEPRAHTA

NT seq 1977 nt +upstreamnt +downstreamnt
ttggcggactccctgaccatgccgcctctgctcacgcagccggaagtgcttgagcgtcgg
ctgaaggagattccgccggagccgggttgctacctgatgcgcgacggagaggacaggatc
ctctatgtcggcaagtcgaaatcgctgcgcagccgtgtccgcagctacttccgaagtcgg
catgatctgtcgccgcgcatccgcctgatgacgcgacaggtctgtgagatcgaattcatc
gtgaccgacagcgaagcggaggctctggcccttgaatccaacctgatcaagaaccatcag
ccgcacttcaatgtgctgctgaaggacgacaagaaatacccctacctctgcatcacctgg
agcgaggtctatcctcgcatcttcatcacgcgacggcgccgattccgcagccccctcgat
cgcttttacgggccctacgtcgacgtcggactgttgcggcgcaccttgtttctggtgaag
agggtcttcccgctgcgacagcgaccgcgaccgttgcaccccgaccgcacttgccttaac
tacagcattggtcgctgcccaggggtttgccaggaaaagatcacctctgaggactaccac
cgaaccctgcgcaaggtggccatggtgtttcaagggcgcagcgatgaactgcagcgtctg
ctcgacgagcagatgaaccgctacgccgaacgtcttgattttgaatccgctgcccgggtc
cgcgaccagctccaggggctcgaccagttgacggctgatcagaagatgagtcttccagac
tccagcgtcagtcgggatgtgctggccctcgcctgcgacgaccgtctggccgctgtgcag
ctgttccagatgcgcgccggaaaacttgtggggcggcttggttacaccgccgatgcttca
gctctggcaccgggtctgattctgcaacgggtgattgaagagcactactcccaggtcgat
gcggttgaagtgccgccggagttgttggtgcaacacgctcttccgcaacagcagcttctt
gaggactggctgacggagcaacgggaacgcaaggtgcagatccactgcccaaaacagcgt
cagaaggcagacctaatcgaactggttcagcggaacgcggaattcgaactgctgcgggcc
aagcaggggcaggagcagcaagcgctagccaccgaggatctggctcagctgttggagatg
ccgacgccgccgcgacggatcgagggctacgacatcagtcacattcagggcagcgatgcc
gtggcctctcaggtggtgtttatcgatggcctgcccgccaagcagcactaccgcaaatac
aagatccgcagcagcagcatccagtccggccacagcgatgacttcatggccatggccgag
atcatgcgccggcgctttcgtcgttgggcccgcgccaaggctgatggtgtcgatgtgggt
gccctgcgccacaaaggtggcagtgccctgcagaccgacggcctcaacgactggccggat
gtggtgatgatcgatggcggcaaaggacaactctctgcggtgatggaggccctgcgggaa
ctcgatctgcacgaggacctcaacgtctgctcgttggccaaacagcgggaggaggtgttc
ctccccggcgaaagtcagccactggagagtgagccggatcaactcggcgtggccttgctg
cgtcgcctgcgggacgaagcccatcgattcgcggtgagcttccaccggcaacaacgtggt
gagcgaatgaagcgttcacgcctctccgacatcccaggggttggtcccaaacgggtgaag
gatctgctggcgcacttccattccatcgatgcgattcagatggcttccgtggatgtgctc
tccaaagcccccggtgtgggaacagctctggccagggacatccacgggtttttccaccct
gctgaggaagccgggcaggatgtctgctcagaagagccccgtgcacacaccgcatga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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