KEGG   Candidatus Nitrosocosmicus oleophilus: NMY3_01659
Entry
NMY3_01659        CDS       T04185                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
taa  Candidatus Nitrosocosmicus oleophilus
Pathway
taa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:taa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NMY3_01659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:taa03021]
    NMY3_01659
Transcription machinery [BR:taa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NMY3_01659
 Prokaryotic type
  Archaeal type
    TFB
     NMY3_01659
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon RB_B Cyclin_N p25-alpha
Other DBs
NCBI-ProteinID: ALI35862
UniProt: A0A654M8N0
Position
complement(1503405..1504325)
AA seq 306 aa
MSNILFVKNVRDLQSQIQSHQHSVIYDYENGEKICKLCGIVVQDKLYDTELDINFCKYKS
DTNTGSPRSIILNVNGMSTAIADYSTKSPKSFSSRKEHNKIEFLHKIVSCSNRKRNLKIV
LDLLDRIKDKLSLTSACIEEALLYYKKALDRGLIKGRSIKELIVACVYVVCKSSSIPRTL
TEISQIVEANEIFAGRCYRLLIRELKIIQVQFKPSIFIRKIADVANIHERTVRESIDMLL
AIQNESLFSGKNSLSLAAAILYITCRKHRQKISQAKIATAANINIMTLRKRLLEVRTVIT
NTPFLN
NT seq 921 nt   +upstreamnt  +downstreamnt
ttgtctaatattttatttgttaaaaatgttagagatttacaatcacagattcagtcgcat
caacattctgttatttatgactatgagaatggtgaaaagatctgtaagctctgtggtata
gtcgtccaggacaaactatatgatacggaattagatatcaatttttgtaaatataaaagt
gatactaatacgggatctccacgttccataatcctaaatgtcaatggaatgtcaactgct
attgcagattatagtactaaaagcccgaaaagcttttctagcagaaaggaacacaataag
atcgaattccttcataaaatagtaagttgttccaatagaaagagaaatctaaaaatagtt
ttagatctgttagaccggataaaagacaaattgtccttaacctcagcctgtatagaggaa
gcacttttgtattacaaaaaggctcttgatcggggactgataaaaggaaggtctatcaag
gaattgatagttgcatgtgtttatgtagtatgtaaaagttccagtattccccgaacgttg
acagaaatttcgcaaatagtagaagcaaacgagatctttgctggaagatgctataggctc
cttataagagagttgaaaataatccaagtccaatttaagccttcgatttttattcggaaa
attgctgatgttgctaacatccatgagagaacagtaagagagtctattgatatgctattg
gcaattcaaaatgaaagcctattctcagggaaaaattcactatccttggctgcagccatt
ctttatattacctgcagaaagcatagacagaagatatcacaggcaaaaattgctactgct
gcgaatataaatatcatgactttacgaaagaggttgttagaggtcagaacagttatcacg
aatacaccattcttaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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