KEGG   Candidatus Nitrosocosmicus oleophilus: NMY3_03573
Entry
NMY3_03573        CDS       T04185                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
taa  Candidatus Nitrosocosmicus oleophilus
Pathway
taa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:taa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NMY3_03573
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:taa03021]
    NMY3_03573
Transcription machinery [BR:taa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NMY3_03573
 Prokaryotic type
  Archaeal type
    TFB
     NMY3_03573
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N HTH_11 RB_B DUF489 PHD_Oberon
Other DBs
NCBI-ProteinID: ALI37755
UniProt: A0A654M2T6
Position
3283049..3283960
AA seq 303 aa
MYNKLIVKNIEKYSPVHQHAVIYDYEKGEKLCKSCGVIVQDKIYDAELDTDFHKYKSDTN
TVLPHSIILNDKGMSTAIADYDTSTSKRFSNRKEHNKIEFLNKIVSCSNKKRNLKIVIDL
LNRIKDKLSLTSFCIEEALSYYKKALEKGLIKGRSIKEMIVSCVYLVCKKTNIPRTLPEI
SQIVQADEIFAARCYRLLMRELKITHVQFKPTIFIRKIADEAEISERTARESIDLLLAIQ
NENVFSGKNSLSIAAAILYITCRKHKQKISQAKIASAANINIMTLRKRLSEVKNVVVNAS
FLN
NT seq 912 nt   +upstreamnt  +downstreamnt
atgtataataagttaatagttaaaaatatagaaaaatattcaccagtacaccaacatgct
gttatttatgactacgaaaaaggtgaaaagctttgcaagtcatgtggtgtcatcgtacaa
gataagatatatgatgccgagttggatactgattttcataaatataaaagcgatactaac
accgtattgcctcattccattattcttaatgataaaggaatgtcaacagcaattgcagat
tatgatacaagtacatctaaaagattttcaaataggaaagaacataataagatagagttt
ctgaataaaatagttagctgctcaaacaagaagagaaatttgaaaatagttatagatctt
ttgaatcgtataaaagataaattatccttgacatcgttctgtatagaagaagcactgtcc
tattacaagaaggcattagaaaagggactaattaaaggaagatcaataaaggaaatgatt
gtttcatgcgtatatctagtttgcaagaaaaccaacattccaagaacattgccagaaatc
tcccaaatagtgcaagctgatgaaatctttgccgccaggtgctatcgtcttttaatgaga
gagttaaaaattacccatgtacaattcaaaccaactatttttataagaaagatagcagac
gaggcagaaattagcgagaggacagcaagagagtcaatagatttgcttttggccatacaa
aatgagaatgttttctctggtaagaactcgctctcaatcgcagcagccatcctttacata
acatgtagaaaacataaacaaaaaatatcacaggcaaaaatcgcttcggcagctaatatt
aacataatgactctaagaaaaagactttcagaagtcaaaaatgtagtagtaaatgcatca
tttcttaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system