KEGG T.acidophilum: Ta0390

Thermoplasma acidophilum: Ta0390

Entry

Ta0390 CDS T.acidophilum

Definition DNA-directed RNA polymerase subunit B (EC:2.7.7.6)

Orthology K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6]
K03045 DNA-directed RNA polymerase subunit B" [EC:2.7.7.6]

Pathway tac00230 Purine metabolism
tac00240 Pyrimidine metabolism
tac01100 Metabolic pathways
tac03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:tac00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:tac00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:tac03020]

SSDB

Motif Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2
RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 TF_Zn_Ribbon
PROSITE: RNA_POL_BETA

Other DBs NCBI-GI: 16081519
NCBI-GeneID: 1456006
UniProt: Q03587

Position 413957..417544

AA seq 1195 aa
MKEIVDAYFKKYGIVNHQLDSMNSFYATPDNPNSVMQQIVDETKVSDDADPGYFVLDPAK
TGGHDIRIYYGRVRENGHYVGEQTIFIGKPEIKEASGASNQITPNEARLRDLNYLAPVTL
KLRIVEDGIEKGSEIIKVGDLPVMVRSKICTLSEENLDQYIEKNNGPIGLSRREKLQYVG
EDPDDPGGYFIIGGSERVIVSLEDLAPNKIMVEWEDRYESKVEVSKVFSQRGGFRALTSM
EKGTDGTINVSIPSVAGTVPLVILMKALGLERDVDVHDAIASVPEMEPIIYSNIEDSKNP
KVLPPNGVNTTEDAISYLEKRFAAGQAKEFRDKKISQMLDHSLLPHLGDSPSDRIRKAIY
LGRMARSLLELSLGIRKEDDKDHLANKRIKLAGDLMDELFRSAFQSVMKDLKYQLEKTYN
RKRGIKIRPAVRQDLLTQRVLHAMSTGNWIGGRTGVSQLLDRVSNLSTISHLRRIISPLT
RTQPHFEARDLHPTQWGRICPNETPEGQNCGLVKNAALLINVTQGIDPDSVMEILKGMDV
REVLEESPKKGRVYLNGDFIGYHDDPRYLVSRIREERRSGRMSDEVNVRYDDNTNEVIVN
SDRGRLRRPLLILKDGKTVLDRTMIERLKHGEISFEDLVKQGAIEWLDAEEEEDTYVAVY
AYDIPEKCPHCNSYLYRSMVDWVNPGESEITLECGFCHQRFNVPSKLSKENTHLEIDPAM
ILGVVASIIPYPEHNSSPRITIASAMAKQSLGFAQSNVRIRPDTRGHLLHYPQVPLVRTR
VMDYIHYDRRPAGQNFVVAVLSYEGYNIQDALVINKAAIERGLGRSTFFRTYSAEERRYP
GGQEDKFEIPTHDIIGARAEEYYKNLDDSGIIFPEAYVEGSDVLIGKTSPPRFLEEGEER
LGPQRRRESSVTMRPNESGYVDNVFLTVSESNSRVVKIKVRSERIPELGDKFASRHGQKG
VVGLVVPQEDMPFTEDGIIPDLIFNPHSIPSRMTVGHILEMIGGKIASRTGRFIDGTIFS
GEPEKSLRDALVKYGFRKSSTEVMYDGITGRRFKADIFVGVIYYQKLHHMVAGKFHARSR
GPVQILTRQPTEGRSRQGGLRFGEMERDTLIAHGAAMVIKDRLLDQSDGTVLYVCGNPSC
GHIAIYDRRKGTLRCPVCGNTGNIYPIETSYAFKLMRDELISLGVVMRLMLGDMK

NT seq 3588 nt +upstreamnt +downstreamnt
gtgaaggaaattgttgatgcgtattttaaaaaatatggaatagtaaaccatcagctggat
tctatgaattctttttatgcgacgcctgataatccaaacagcgtaatgcagcagatcgtg
gatgaaacgaaggtatctgacgatgccgatccaggatattttgttctggatcctgcgaaa
accggtggtcatgatataagaatatactacggccgtgtcagggaaaacggccattacgta
ggtgaacagaccatattcataggaaaaccggagataaaggaggcttccggtgcgtcgaat
cagatcactccaaacgaggcaaggctgagggatctgaactacctggcaccggttacgctc
aagctgagaattgttgaggatgggatagagaaagggtcagagataatcaaggtcggtgat
ctgcccgtcatggtcagatcaaagatatgcacactttccgaggaaaatcttgatcagtac
atagagaagaacaatggccccatcggattatcgaggagagagaagctgcagtacgtcggc
gaggacccggatgatccaggaggttacttcatcatagggggatcagagagggtcatagta
tcgctggaggatctcgcaccaaacaagatcatggtggagtgggaagaccggtacgaatca
aaggtcgaggtatccaaggtcttctcgcagcggggaggtttccgtgcgctcaccagcatg
gagaagggaacggacggaaccataaacgtatcaataccgagcgttgcgggcaccgttccg
ctggtaatactcatgaaggcgcttggccttgagagagatgtggacgtacacgatgcgata
gcctcggtaccggagatggaaccgataatatactcaaacattgaagattcaaagaatccg
aaggttctcccaccaaacggtgtcaacacaaccgaggatgcaatatcgtacctcgagaaa
aggtttgcagccggccaggccaaggagttcagggacaagaagatatcgcagatgctggat
cattctctgcttccgcatctcggcgattcgccttccgaccgcataaggaaggcgatatac
ttgggaaggatggccagatcgcttctggaactgagcctgggaataaggaaggaagacgat
aaggatcacctcgcaaacaagaggataaagcttgccggtgatctgatggacgagctcttt
agaagcgcgttccagagcgtgatgaaggatctcaagtaccagttggagaagacgtacaac
aggaagcgcggtataaagataaggccggccgtgaggcaggatctgctgacgcagagggtt
ctccatgccatgtccacgggcaactggataggcggcagaacgggcgtatcgcagctactg
gacagggtttccaacctcagcacgatcagccatctgaggaggataatttcgcctcttaca
aggacgcagccccacttcgaggcaagggaccttcatccgacccagtggggaaggatatgc
cccaacgaaactccagagggacagaactgcggtctggtcaagaacgccgccctcctcata
aacgtgacgcagggcatcgatcctgacagcgtcatggagatactgaaggggatggacgtc
cgcgaggtcctggaggagagcccgaagaaagggcgtgtttatctgaatggagatttcata
ggatatcacgatgatccgagataccttgtttcgaggatacgcgaggagcgcaggtcaggc
cgcatgtcggatgaggtaaacgtcaggtatgatgacaacacgaacgaggttatagtgaac
agcgaccgcggaaggctgcggaggccgctgctcatactcaaggacggaaagaccgtactg
gacaggacgatgatcgagaggctgaagcacggtgaaatatcgtttgaagatcttgtgaag
cagggtgcgattgaatggctcgatgcagaggaagaggaggatacatacgtggcagtttac
gcttacgacataccggagaaatgcccgcactgcaactcatacctctacagatccatggtg
gactgggtcaatccgggagaatccgagataaccctggaatgcggtttctgccaccagagg
ttcaacgtgccttcaaaactttcaaaggagaacacgcaccttgaaatcgatccagcgatg
atactcggtgttgtcgcctcaataatcccgtatccggagcacaactcgtctccgaggatt
acgatagcgtctgcaatggccaagcagtctcttggctttgcccagtcaaacgtgaggata
aggccggataccaggggccatctgctccattacccgcaggttccgctcgttcggacacgc
gtcatggattacatccactacgaccgcaggccggccgggcagaacttcgttgttgcggtt
ctttcatatgaaggatacaacatacaggatgcactggttataaataaggcagccatagaa
aggggccttggcaggagcactttcttcaggacgtactctgcagaggagaggagatacccc
ggaggccaggaggacaagtttgagattcctacgcacgatataataggggcaagggcagag
gagtactacaagaacctggatgacagcggtataatattccccgaggcctatgtcgaagga
tcagacgttctcatagggaagacatcacctccaagattcctggaggagggtgaagagcgc
cttggtccgcagaggaggcgcgaatcatccgttaccatgaggccaaacgaaagcggttac
gtcgacaacgtattcctcaccgtatcggagagcaacagccgcgtagtgaagataaaggtc
aggagcgagaggatacccgagctcggcgacaagtttgcgtcccggcacgggcagaagggg
gttgttggccttgtagttccgcaagaggatatgcccttcacggaggacgggataataccg
gatcttatattcaatccacattccattccgtccagaatgacggtcggccacatactggag
atgataggcggcaagatcgcatccaggacaggaaggttcatcgatggtactatattcagc
ggagagccggaaaagagcctgagagacgccctggtgaagtacggcttcagaaagtcctca
accgaggtcatgtatgatggtattactggcagaaggttcaaggccgatatctttgttggc
gtgatatactaccagaagctgcatcacatggtcgcaggtaaattccatgcaaggtccaga
gggccggtgcagatactgacgaggcagccaacagaaggaaggtcgaggcagggaggtctc
aggttcggtgagatggagagggataccctaatagcgcatggggcggcgatggtcataaag
gatcgtctgctagaccagagtgatggtacagtactgtacgtgtgcggaaacccctcatgc
ggtcacatcgcaatatacgaccgcaggaagggcacgctgagatgccctgtgtgcggaaat
acaggaaatatttatccgattgagacaagctatgccttcaagctgatgagggatgagctg
atctctctcggtgttgttatgaggttaatgctcggtgatatgaaatga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (2)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (8)   
   PROSITE (1)   
All databases (26)

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