KEGG   Trichoplax adhaerens (placozoan): TRIADDRAFT_38029
Entry
TRIADDRAFT_38029  CDS       T01069                                 
Name
(RefSeq) expressed hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tad  Trichoplax adhaerens (placozoan)
Pathway
tad03020  RNA polymerase
tad03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRIADDRAFT_38029
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRIADDRAFT_38029
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tad03021]
    TRIADDRAFT_38029
   03400 DNA repair and recombination proteins [BR:tad03400]
    TRIADDRAFT_38029
Transcription machinery [BR:tad03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TRIADDRAFT_38029
  RNA polymerase III system
   RNA polymerase III
     TRIADDRAFT_38029
  RNA polymerase I system
   RNA polymerase I
     TRIADDRAFT_38029
DNA repair and recombination proteins [BR:tad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRIADDRAFT_38029
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF6875 FAD-oxidase_C
Other DBs
NCBI-GeneID: 6756080
NCBI-ProteinID: XP_002115057
JGI: 38029
UniProt: B3S3Q9
AA seq 210 aa
MEDEEEAYKLWRIRKTVMQMCHDRGYMVSQEELDQTFDQFHEQFYSEMSESSQVRGLLSM
LVHHIDDPTEQLFVFFPDEPKVGINTIKKYCQRMQRENINRAIIIIQSGMTPTAKQSLID
MAPKYTLESFMESELMINITEHHLVPKHIVMSPEEKAELLARYKLKEHQLPRIQVGDPVA
RYYGLKRGQFVRIIRPSETAGRYITYRLVS
NT seq 633 nt   +upstreamnt  +downstreamnt
atggaagacgaagaagaagcctacaagttatggcggatcagaaaaactgtcatgcaaatg
tgccatgacagagggtatatggtatcgcaggaagaattggatcaaacgttcgatcaattt
catgaacagttttacagcgaaatgagtgaaagtagccaggtacgcggattattatccatg
ttggtgcatcacatcgatgatcctacagaacaactgtttgttttcttcccggacgagcct
aaagtggggattaacacgattaaaaaatactgccaacgaatgcagcgagagaatatcaat
cgcgctataatcatcatacaatctggaatgactccaaccgcgaaacagtctttgatcgat
atggctcctaaatacacattggaatcattcatggaatccgaattaatgataaatataacc
gaacatcatttagttcctaaacatatagtcatgagtcctgaagaaaaggctgagcttcta
gctagatacaaattaaaggagcatcaattacctaggattcaagtaggtgatcctgtagct
cgttattatggtttaaagagagggcagtttgtaagaattatcaggccaagtgaaactgca
ggaagatatataacatatcgcttagtttcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (39)   

Download RDF
DBGET integrated database retrieval system