KEGG T01179: Thal

Thermocrinis albus: Thal_0274

Entry

Thal_0274 CDS T01179

Definition

DNA ligase I, ATP-dependent Dnl1

Orthology

K10747

DNA ligase 1 [EC:6.5.1.1]

Organism

tal Thermocrinis albus

Pathway

tal03030	DNA replication
tal03410	Base excision repair
tal03420	Nucleotide excision repair
tal03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; DNA replication [PATH:tal03030]
Genetic Information Processing; Replication and repair; Base excision repair [PATH:tal03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tal03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tal03430]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

289548048

NCBI-GeneID:

8813762

UniProt:

D3SP22

Position

272938..274671

AA seq 577 aa
MKFIELAQYFKELENTTSRLHMADILYRLLKSCSGEEVDKVIYLTLGELLPPFTGVEMGI
SEKLSLEAISKATGTKLSQVESIYRQTGDIGETAATLIKWEGKGLSVVQVYDELLKIAKT
RGTLDKLMALISLLRGLSPLCAKYVMRIVVGRLRLGVGEATLLDALAMLAGNRNWRQDIE
RAYNLCSDLGLVARTLLEKGIEGVKGMKLQVGYPVRMALAERVSSAEEIIKRLGKCAVEA
KYDGLRLQIHKSKDRVEIYSRNLERMTEMFPDITSAVLSALAHVEDIIFEGEAISYDEET
GEFHPFQITIQRKRKYGVYQYSKEYPLKLFSFDLLYVNGNDMTEEPFIERRRTLENLLSG
KQDTILLSEMRIVETAKEIEEFFQDAVSRGLEGIMAKRLDAPYTAGSRNFNWIKLKRSYR
GALTDTVDVVIVGYFYGKGARAKLGIGALLTAVYDPSTDTFKTISKVGSGFTEDEWIRLK
NLLDEIKLPHRHARVDSILEADVWVEPKYVVTVTADEITRSPLHTAGRTITEPGYALRFP
RAVGFIRIDKKPEDATTVEEILRLYQLQRKVSTEGET

NT seq 1734 nt +upstreamnt +downstreamnt
atgaagtttatagaacttgcccagtactttaaagagctggagaacaccaccagcagactg
catatggctgacatcctctacagacttctcaagtcttgcagcggagaagaggtagataag
gtgatttatctcacgctgggggaacttctcccacccttcacaggagtggagatgggtata
tcggagaaactctccttggaagccatctccaaggcgacgggaactaagttgtcgcaggtg
gagagtatctacagacagacgggagatataggagaaacagccgccaccttgataaagtgg
gaggggaaaggtctttctgtggtacaggtttacgatgagcttctcaaaatagccaaaacg
aggggaactttggacaagctgatggccctaataagtttgctgaggggtctctctcctctg
tgtgccaagtacgttatgcgtatcgtggtaggaagactgaggttaggcgtgggagaggcc
accttactggacgctttggccatgctggcggggaacagaaactggcgccaggatatagaa
agggcctacaatctgtgttccgatctgggattggtggccagaacccttttggagaagggg
atagagggagtgaaaggtatgaagctacaggtaggttatcccgtgaggatggccctggca
gagagggtatcttctgcggaggagatcataaagaggctgggaaaatgtgctgtggaagcc
aagtatgacggcctacgtctccagattcacaaaagtaaggacagggtggagatatactcc
agaaatctggaacggatgacggagatgtttcctgacataacctccgctgttctttccgca
ctggctcatgtggaggacataatctttgaaggagaagcgataagttacgacgaagagacg
ggagagtttcatccctttcagataaccatccagagaaagagaaagtacggtgtttatcag
tactctaaggagtatcccctcaagcttttctcctttgatctcctttacgtgaacggtaac
gacatgacggaggaacctttcatagagagaaggcgcaccttagagaacctcctttcagga
aaacaggacactatccttttgtcagagatgaggatagtggaaacagccaaagagatagaa
gagttctttcaggacgctgtttcacggggtcttgagggtataatggccaagaggctggat
gctccctacaccgccggctcaagaaacttcaactggataaagctaaagcgcagctacagg
ggtgcgctgacagacacggtggatgtggtaatagtggggtacttttacggtaagggggca
cgtgccaagcttgggataggagctcttctcaccgctgtctacgatcctagcactgacact
tttaaaaccatcagcaaagtgggatccggtttcaccgaagatgagtggataaggctcaag
aaccttctggacgagataaaacttccccaccgacacgcacgggtggactctatactggag
gcggacgtatgggtagaacccaagtacgtggttaccgtcacagcggacgaaattacgcgt
tctcccttacacaccgcaggcaggaccattacagaacccggctatgcccttcgcttcccg
agggctgtgggattcatcaggatagacaagaaacctgaagatgctacaacggtagaggaa
atcctgagactgtaccagcttcagaggaaagtgagtacggaaggagaaacataa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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