KEGG   Thermocrinis albus: Thal_0315
Entry
Thal_0315         CDS       T01179                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
tal  Thermocrinis albus
Pathway
tal03030  DNA replication
tal03430  Mismatch repair
tal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Thal_0315
   03430 Mismatch repair
    Thal_0315
   03440 Homologous recombination
    Thal_0315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tal03032]
    Thal_0315
   03400 DNA repair and recombination proteins [BR:tal03400]
    Thal_0315
Enzymes [BR:tal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Thal_0315
DNA replication proteins [BR:tal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Thal_0315
DNA repair and recombination proteins [BR:tal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Thal_0315
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 HROB DUF6282
Other DBs
NCBI-ProteinID: ADC88950
UniProt: D3SP63
Position
315000..318452
AA seq 1150 aa
MRDFVHLHLHTQYSLLDGAIKIKDLAERAQAYGYRAVAITDHGNLFGLLEFYKTLKEKGI
KPLLGMEAYFTTGSRFDRKGKGSDDNLTDRINHHIILIAKDQEGLKNLFRLSSLSYREGF
YYKPRIDYELLQKYHRGLIAVTACLKGVPTYYASMGEERKAEEWVKKLKDLFGDDLYLEL
QANGLPEQETANRVLINIAKRFGVKLVATADAHYLDPEDKTAHSVLMALQMKKTLQDIQK
EGLKYSVCDLHFAPPQEMWERFRGKFDGWEDALKNTLEVAEKCADSFPQLENKDYLLPKA
YEGVEEGQLLEDLAREGLRRRQALGHCPDSKEYWDRLEYEIEQVRRMGFAGYFLIVQDFI
NWAKNQGVPVGPGRGSAAGSLLAYALGITDVDPVKHGLLFERFLNPERISMPDVDVDFCM
EGREKVIQYVREKYGEDKVAQIITYNVMKAKQALRDAARALGLPYSVGDRLAKLVPPGDV
QGSWLSLEEMVHTPLEELLEKYGHHRTDIEENVKTFRQLMETDAEIRRVVEIALKLEGLV
RHTSLHAAGIVISPLPLEEVVPTYYDDGQVATQLDMGQLEKLGLVKMDFLGLKTLTELNA
MRNLIRERHKADVDFLKIPLDDERTFELLRKGNTSGVFQLESKGMQRLLSKLSPDRFEDL
VAAIALYRPGPLKSGLVDSYVKRKHGKEEVEYPFPELEPVLKETYGVWVYQEQIMKASQI
LAGFTPGEADTLRKAIGKKDKELMASLREKFIRGAVERGYKEEKITKLWEDFEKFASYSF
NKSHSVAYGYLSYWTAYLKAHYTEEFFAVKLSYEKNDAKFLALVNDAKKHRITILPPDIN
KSHVHFVIEGDRTLRFGLARIKGIGEDTAYQIVKARKTTWTQPSQVARAAGLNKKALEAL
IKAGAFDFTGKSRTALLKALESKNALLGGVSLFEKNSQSTEDRQEDIFHYEKEVLGFYLT
RHPIDVWEGFLEDTCKKLEEVEELEGGPYLFAGSLTDIKVKKTTKNTLMATAHLTDRTGM
VPLIIPPSVYEEEKDKLKEDSVVVIEGLVERDEETEEVSIIARAVHGVEEFLKRKGHYIT
LIFTCELEEDKLLQVHRTLTAYTGPDGLPITIEIITPRYRTLLEVDPRIRVVPTPELREA
LRSLGVEIRV
NT seq 3453 nt   +upstreamnt  +downstreamnt
atgagggactttgtccaccttcatcttcacactcagtactccctcctggacggtgctata
aagataaaggatcttgctgaaagagcacaggcttatggatacagagcggtagccataaca
gatcacggtaacctctttggacttttggagttctacaagacccttaaggaaaagggtata
aaaccccttctgggaatggaagcctacttcaccacaggttcccgttttgacaggaaaggt
aagggaagcgatgacaacctcaccgacaggataaaccatcacataatcctcatagcaaag
gaccaggagggacttaaaaacctcttcagactctcctccctttcctacagggaaggtttc
tactacaagccccgtatagattatgagctccttcagaagtatcataggggactgatagcg
gtgacggcttgtctgaaaggtgtgcccacttattacgccagcatgggagaggaaagaaaa
gcggaggagtgggtaaagaagctgaaggacctttttggagatgatctgtatttggaactt
caggctaacggtctgccggagcaggaaactgccaacagagttctcataaacatcgccaag
aggtttggggtcaagttggtggccaccgccgacgctcattatctggacccggaggacaaa
accgcccactctgttctcatggcccttcagatgaaaaaaacactacaggacatacagaag
gaaggacttaagtactcggtctgcgatcttcattttgcccctccccaagagatgtgggaa
cggttcagaggaaagtttgatggatgggaagacgctctgaagaacactttggaggtggcc
gaaaagtgtgccgacagttttcctcagctggaaaacaaagactatctcttacctaaagcc
tacgaaggtgtggaggagggtcagcttctggaggatctggcaagggagggactcagaaga
aggcaggctcttggacactgtcccgacagtaaggagtactgggacagactggagtacgaa
atagaacaagtacgcaggatggggtttgcagggtacttcctcatagtgcaggattttata
aactgggctaagaaccagggtgtacctgtaggacccggaagaggttccgcagcgggatct
ttgttggcctacgctcttggtataacggacgtggatccggtaaaacacggccttctcttt
gagagattccttaatccggaacgcatctccatgccggacgtggatgtggacttctgtatg
gagggaagggagaaggtgattcagtacgtgagagaaaagtacggagaggacaaggtggct
cagatcatcacctacaacgtgatgaaggccaaacaggcactgcgcgatgcggcaagggct
ctcgggcttccctattcggtgggtgataggctggccaagttggtacctcccggcgacgta
cagggctcgtggcttagcctggaggagatggtacacacccctctagaagaacttctggag
aagtacggccatcacagaaccgatatagaggagaacgtaaagaccttcagacagcttatg
gagacggacgcggagataagaagggtggtagagatagctcttaagctggaggggctcgtc
agacatacctcactgcacgcggcaggtatagtgatatctcctttacctttggaggaggta
gtacctacttactacgacgacggtcaggtggccacacagctggacatgggccagctggaa
aaactgggtctcgtaaagatggactttctgggtttgaagactcttacggaacttaacgcc
atgaggaacctgataagggagaggcacaaggcggacgtagactttctgaagatacctttg
gacgacgagagaacctttgagctcctgaggaagggtaacacctccggcgtgttccagttg
gaaagtaagggaatgcagagactcctcagtaagctgtctcccgataggtttgaagacctt
gtggctgccatagccctttacagaccaggacctctcaaatcgggtcttgtggactcttac
gtgaagagaaagcacggtaaggaggaagtggagtatcctttccctgaactggagcccgtt
ttgaaggaaacttacggtgtatgggtgtatcaggagcagataatgaaggccagtcagata
ctggcaggctttactcccggtgaggcggacaccctcagaaaggccataggtaagaaggat
aaagaacttatggcctctctgagggaaaagtttataagaggagcggtagagaggggctac
aaggaggagaagattaccaaactgtgggaggactttgagaagtttgccagttactccttc
aacaagtctcactcggtggcttacggttatctctcttactggaccgcttacctcaaagcc
cactacacagaagagttctttgcggtgaaactctcttacgaaaagaacgacgccaagttt
ttggcactggttaacgatgccaagaagcatcgcatcactatactaccacctgatatcaac
aaaagccacgtccactttgttatagaaggtgatagaacactaagatttggtttagcacgt
ataaagggtataggagaagacacagcctatcagatagtgaaagctcgtaaaaccacctgg
actcagccttctcaggtggccagagcggcgggtctcaacaagaaagctttggaagccctc
ataaaggcaggagcctttgattttaccggaaagagtagaaccgcattactgaaagcgttg
gaaagtaaaaacgctcttttgggtggtgtcagtctctttgagaaaaactcccaaagcacc
gaagaccgtcaagaagacatattccattacgagaaggaagttttgggattttacctcacc
agacaccccatagacgtgtgggaaggttttctagaagacacctgcaagaaactggaagaa
gtggaagaactggaggggggtccgtatctgtttgcaggatctcttactgacataaaggtg
aagaagactacaaagaacacccttatggccacagctcacctcaccgacagaacaggtatg
gtacccctgataatcccaccttctgtgtacgaagaggagaaggacaaactgaaagaagac
agcgtggtggtgatagagggcttagtggagagggacgaggagacggaagaagtcagtata
atagcacgtgctgtacacggtgtggaggagtttctcaaaagaaagggtcattacatcact
ctaatcttcacctgtgagctggaggaggacaaactcctgcaagttcacaggacactgacc
gcttacacaggtccagatggccttcccatcaccatagagatcatcacaccccgttatcgc
actttactggaggtggatccacggatacgcgtagtccccacacctgaactgcgggaagca
ctgcgttctttgggtgtggaaatcagagtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (286)   
   KEGG ORTHOLOGY (1)   
   RefGene (283)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (304)   

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