KEGG   Thermovibrio ammonificans: Theam_1182
Entry
Theam_1182        CDS       T01391                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
tam  Thermovibrio ammonificans
Pathway
tam03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Theam_1182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tam03400]
    Theam_1182
DNA repair and recombination proteins [BR:tam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Theam_1182
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 GIY_YIG_2 CCDC92
Other DBs
NCBI-ProteinID: ADU97146
UniProt: E8T2T7
Position
complement(1158103..1159863)
AA seq 586 aa
MKEKLKEVPELPGVYLFKDSAGKVLYVGKSKNLRERLSTHLNATDPNDKSYRIVRASADF
DYIVVRNEREALALEAELIKEHLPPFNVLLKDGKSYPYLVVTDEEFPTVKVVRRSFSGGG
ERFGPFVPPKSAYNLRELLTRLFRLRSCKELKKRDKPCLQYHIERCTAPCAGLVSKKEYR
KQVERALRFLKGDVKGLISELHSEIEEAAEKLEFERAARLRDQLIAVKAVFEKSAPLFEE
FKECDIFYLEERGELFTGVKLTVRGGIIYGKESFHLDPVDPWDEGLLSSVFSLGVEKLDV
NTVGTMWLKAYYGEEGVPAGVKLLANFKPLGDYEVHPIPEELLPLLRRNRRAVSYSLSLK
ELEREFEEVFGEPLPLRVECFDISTLQGEATVASCVVWEKGQFKKDEYRRFKVKSVSGVD
DYASMEEVLTRRFRRIKRGEVKEPDLVIVDGGIGQLNVALKVRDTFGLGFRVFSIAKREE
VVYTDLGEVVETKRFPHLFRFFTSIRDEAHRFALSYNRKLRTDKMLHSFLSSVKGIGPKR
RALIEKLYPDLSELAAVSPSELAKLGIPLKVAREVVERARELFKEV
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgaaggagaagttaaaggaggttccggagcttcccggcgtttacctctttaaggattct
gcgggaaaggttctctacgtcgggaagtctaagaacttgagggagcgtctctctacacat
ttgaacgctacagaccctaacgataagagttacaggatagtcagggcctctgccgacttt
gactacatagtggtgaggaacgagagggaggcccttgcccttgaggccgagcttataaag
gagcacctgcctccttttaacgttctgcttaaggacggtaagagctacccctacttggtt
gttaccgacgaggagtttcccaccgtaaaggttgttagacgctcctttagcggcggaggg
gagcgctttgggcccttcgttcccccgaagagcgcttacaacctgagggagcttctgacc
cgccttttcaggctgaggagctgcaaggagcttaaaaagcgggacaagccctgtttgcag
taccacatagagaggtgcacggccccctgtgccggccttgtctctaagaaggagtaccga
aagcaggtagagcgggccctgaggtttttgaagggagacgttaaggggctcatatccgag
cttcactccgagatagaggaggccgccgagaagctggagtttgagagggccgcgaggctg
agggaccagctcatagcggtgaaggcggtctttgaaaagagcgctcccctctttgaggag
tttaaagagtgcgacatcttctaccttgaggagaggggggagctctttaccggcgtgaag
ctcaccgtgaggggcgggataatctacggcaaggagagcttccaccttgaccctgttgac
ccttgggatgagggccttttaagctcggtcttctccttgggggttgagaagctcgacgtt
aacaccgttggaaccatgtggcttaaggcctactacggtgaagagggtgtacctgcgggg
gtgaagctccttgcgaactttaagccgctgggtgactacgaagttcacccgatacccgaa
gagcttctccccctgctcaggcgcaacaggcgggccgtttcctacagcctttcgctgaaa
gagctcgagagggagtttgaagaggtcttcggcgagccccttcccttaagggttgagtgt
ttcgacatctctaccctgcagggggaagcgacggttgcctcttgcgttgtgtgggagaag
gggcagtttaagaaagacgagtacaggcgctttaaggtaaaaagcgtttccggcgtagac
gactacgcctctatggaggaggttctcacaaggcggttcaggcggataaagaggggagag
gttaaagagcccgaccttgttatcgtagacggtggaatcggtcagctcaacgtggccctg
aaggtgagagacaccttcggccttggctttagagtcttttcgatagccaaaagggaagag
gttgtttacacagacttgggggaagttgttgaaaccaagcggttcccccacctctttcgc
ttcttcacatctataagggacgaggcccaccgctttgccctttcctacaacaggaagctg
cggacagacaagatgctccacagcttcctgagctccgttaaggggataggaccgaaaagg
agggcccttatagagaagctctaccccgacctctctgagcttgccgcagtatctccgtct
gagcttgcaaaactcggaatccccctgaaggttgcccgggaagttgttgagcgggcacgg
gaactctttaaggaggtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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