KEGG   Theileria annulata: TA18990
Entry
TA18990           CDS       T00253                                 
Name
(RefSeq) DNA-directed RNA polymerase alpha chain, putative
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
tan  Theileria annulata
Pathway
tan03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TA18990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tan03021]
    TA18990
   03400 DNA repair and recombination proteins [BR:tan03400]
    TA18990
Enzymes [BR:tan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TA18990
Transcription machinery [BR:tan03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TA18990
DNA repair and recombination proteins [BR:tan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TA18990
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD
Other DBs
NCBI-GeneID: 3863632
NCBI-ProteinID: XP_954587
UniProt: Q4UG79
Position
1:complement(2326222..2328827)
AA seq 680 aa
MQNVVIFNLFVIIFWALIHSKATYRNKNFNRRLKVDSHLLPYLYITQSIHNNLNLKTYTN
FDILKSNIKNVKLFGVRKSSTVLTALNPENAELHPETLSRVESKLTPEELENLKKKGLIE
GDPNTWRNWHIISKGEWDDIGPKVLPGMEKNLKITEPYAIRKPLKYWGFMRGIDCNILSY
PIVYEYYKHIVEKVRVFKHGGNNPLFNPLLFQPNYMMDKDRFGIFYDDPRLFEGWVNANE
DTPTKVKEASDLIRIPDTGRLYQKFYMGPYPVTMGWTIGSLLKVMTQSRCPGHAVVAVKI
HNMNKDTTVDGVADDLLNIALNFKMVALQTLEPGKEARVRTKIKGPAMVCAGALEWPPFV
KICNPESYITKLEEGAELDLEIKIEWGRGFWMADSKGLYRVEEGANSLCQKRRDIKEVKE
EGFYPTSCVFGGCRMIRLAVHKLMGQRWCSLTYTCPDPMDQLVVEIWTDVSTTPKHVLEF
GLCEVIAWLTELKRQVSHDVDFENEDEQLKDIWEKIDKYGSIKHRQELMGGPPVIPLHET
DAIPNLRQEHCQYLDPGDHTKVPQAPFSLPSSRPDKPELDSLQWLAEELQQEEYIEKSEI
NAKNFERFIPKPVEDTFENKDIDLLPVNSDIISSLRMSGFNIMSDIMDYSVDELSHFPNL
SVETAKVIKDFLNHHKSSIS
NT seq 2043 nt   +upstreamnt  +downstreamnt
atgcaaaatgtcgtaatatttaacttgtttgttattattttttgggcccttatacactcg
aaggcaacgtatcgcaataaaaattttaatagaaggctcaaagtagattcacacctttta
ccatatttatacattacacaatcaatacacaataatcttaatttaaaaacatataccaat
tttgatatattaaagagtaatataaagaatgtgaaattgtttggagtaagaaaatcatct
accgtactgactgcccttaatcctgagaatgctgaattacacccagaaactctaagtaga
gtggagtccaagttaacccctgaggaacttgaaaatctcaaaaagaaagggttaattgaa
ggcgatccaaacacttggaggaattggcacattatatcaaagggcgagtgggatgatatt
ggaccgaaggtactcccgggaatggagaaaaatctcaaaatcacagaaccttatgcaata
aggaaacctcttaaatattggggatttatgagaggaatagattgtaacatattgtcgtat
ccgatagtgtatgagtactataaacatatagttgaaaaagttcgtgtatttaaacatgga
ggaaataacccattgtttaatccactcttgttccagcctaattacatgatggataaggac
agatttggtatattctacgacgatccacggcttttcgaaggatgggtcaatgcgaacgaa
gacacaccaaccaaagttaaagaagcctctgatcttattaggattccagatacaggaaga
ctataccagaagttttacatgggaccatatcctgttactatgggatggacaataggctca
cttttgaaggttatgacccagtcaagatgcccaggccacgcagttgttgctgttaaaata
cacaatatgaacaaggatacaactgtagatggagttgcagatgatttactaaacattgca
ttaaattttaagatggttgctttacaaactctggagcctggaaaagaagcaagagtaaga
actaagattaagggcccagcaatggtatgcgcaggagccttagaatggcctccgtttgtt
aaaatttgtaatcctgagagttatataacaaaactcgaagaaggtgctgaacttgacctt
gaaattaagatagaatggggaagaggtttctggatggcggattctaaaggactatataga
gttgaggagggagcaaattcactgtgccagaaacgaagagatataaaagaggtgaaagag
gaagggttttaccctacgagttgcgtctttggaggttgcagaatgatacggttagcagtc
cacaaactcatgggacaaagatggtgttcattaacatacacttgtcccgatcctatggac
cagttagtggttgaaatttggacggacgtctcaaccacacccaaacatgtattagaattc
ggattatgcgaagttatcgcatggctcactgagttgaaacgccaggtttcacacgacgtt
gacttcgaaaatgaagatgagcaacttaaagatatatgggaaaagatagataaatacggc
tctataaagcatagacaagaactgatgggtggtcctccagtgatcccccttcatgagact
gatgctatacctaacttgagacaagaacactgccaatatttggacccaggtgatcacacc
aaagtaccacaagctccattttcattacccagctcaagaccagataaacctgaattggat
agtttacagtggttggcggaagagcttcagcaggaagaatacatcgaaaaatctgaaata
aacgcaaagaactttgagaggtttatccccaaaccagttgaagataccttcgaaaacaaa
gatatcgatctcttgccagttaactctgatattatttcttcactcagaatgtctggattt
aatatcatgtcggatataatggactactcagtggacgaattgtcacacttcccgaacttg
tcagttgaaaccgccaaagtcatcaaagactttcttaatcaccataaatcatcaatttca
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (32)   

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