KEGG   Thiomicrospira aerophila: THIAE_03330
Entry
THIAE_03330       CDS       T03589                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
tao  Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:tao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tao03009]
    THIAE_03330 (rimO)
Enzymes [BR:tao01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     THIAE_03330 (rimO)
Ribosome biogenesis [BR:tao03009]
 Prokaryotic type
  ribosomal protein modification factors
   THIAE_03330 (rimO)
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM CLP1_P YebF RNase_II_C_S1 Methyltransf_2 DUF5005
Other DBs
NCBI-ProteinID: AHF00941
UniProt: W0DVP0
Position
702582..703928
AA seq 448 aa
MTIALPVRTPKVGVVSLGCPKATVDSERILTQLRSEGYELTSSYEGADTVIVNTCGFIDS
AVQESLDAIGEALRENGKVIVTGCLGARDEEVLKHYPQVLSVSGPQAYETVLNAVHDVVA
PPEHNPFVDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVEEVLDEA
KRLVEAGVQELLVISQDTSAYGVDVKHKLAFWNGQPVKTSMTGLVKALGDMGAWVRLHYV
YPYPNVEEVIPLMVEGKVLPYLDMPLQHADPRVLKAMRRPGNIDRQLERIQQWREQVPDL
TLRSTFIVGFPGETEEEFQRLLDFLAAAQLDRVGCFQYSPVEGAAANEIAEQVPDEVKQD
RYDRFMQTQQAISAQKMQAKIGRVYEVLVDEVDEEGAIARSQADAPDIDGMVFIPDGHEL
SPGDRLKVRIFAADEYDLWGEQVDLDAK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgacgatagcattacccgtccgcacccctaaagtgggagttgttagtttaggttgtccg
aaagcgactgtcgattcagagcgtattttgacccagttacgcagtgaaggctatgagctt
acaagttcttatgaaggcgcggataccgttatcgttaatacttgtggctttattgattcg
gcggtacaagaatcacttgatgctattggtgaggcgctgcgagaaaacggtaaggttatt
gtgacaggttgcttgggtgcgcgtgatgaagaagtgcttaaacattatcctcaggtactg
tcagtatcgggtccacaggcgtatgagacagtacttaatgcggtgcatgatgttgtagcc
ccacccgagcataatccgtttgtcgatttagtgccgccgcaaggcataaaactaacgccg
cgccactatgcctatttaaaaatttctgaagggtgtaatcacacctgttcgttttgcatt
atcccttcgatgcgtggcaagttggtgagtcggccggttgaggaggtgttggatgaagcc
aagcgccttgttgaagcaggcgtacaggaattgttagttatctcgcaagatacctctgct
tacggtgtcgatgtaaaacacaagcttgctttttggaatggtcagccagttaaaacctcg
atgacaggcctggtaaaagccctaggcgatatgggcgcctgggtacgtttgcattatgtt
tatccttatcctaatgtggaagaagtcattcctttaatggttgaaggcaaggttttgcct
tatctggacatgccgctgcaacacgcggacccgcgggtgcttaaagcgatgcgtcgccca
ggcaatattgatcgccaattggagcgaattcaacaatggcgcgagcaggtgccagattta
accctacgttcaacctttattgtcggcttccctggcgaaactgaggaagaattccagcgt
ttattggactttttagcggcggcgcagttagatcgcgttggctgtttccagtattcgccg
gttgagggcgcggctgcgaacgagattgccgagcaggtgccggatgaggttaagcaagat
cgttatgaccgttttatgcaaacccagcaagcgattagtgcgcaaaaaatgcaggctaaa
attggtcgcgtttacgaagttttagttgatgaagtggatgaggagggcgccattgcgcgt
tctcaggccgatgcacccgatattgatggtatggtatttatccctgatggtcatgagtta
tcaccgggtgatcgtcttaaagtaaggatttttgctgcagatgaatatgatctgtggggt
gaacaggttgacctggatgctaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system