KEGG   Thiomicrospira aerophila: THIAE_04865
Entry
THIAE_04865       CDS       T03589                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
tao  Thiomicrospira aerophila
Brite
KEGG Orthology (KO) [BR:tao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tao03032]
    THIAE_04865
   03400 DNA repair and recombination proteins [BR:tao03400]
    THIAE_04865
Enzymes [BR:tao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     THIAE_04865
DNA replication proteins [BR:tao03032]
 Prokaryotic type
  DNA Topoisomerases
   THIAE_04865
DNA repair and recombination proteins [BR:tao03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      THIAE_04865
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C CryBP1
Other DBs
NCBI-ProteinID: AHF01209
UniProt: W0DW59
Position
996408..999035
AA seq 875 aa
MSEFAREIHPISLEEEMKQSYLSYAMSVIIGRALPDVRDGLKPVHRRVLFAMNELHNDYN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDNPAAM
RYTEVRMAKIAHELLADLDKETVDFTPNYDGSESEPNVLPSRIPNLLVNGSAGIAVGMAT
NIPPHNLTETINACLAYIENPDIDVAGLIEHMPGPDFPTYGIINGTRGIREAYETGRGRV
QIRAKTQIETDKSGKQAIIVNEIPYQVNKAKLIERIAELIKEKKIDGITALRDESDKDGM
RIVIELRRGENADVMINNLYKLTAMQTVFGINMVALINGQPKLLNLQQIIQAFVRHRREV
VTRRTIFELRKAREKAHLLEGLAVALSNIDEMIELIKSSATSQIAKERMLERDWPAGHVL
QLLERVEANDTRPEDLAAGFGMVSADSYRLSPVQAQAILDMRLNRLTGLEQDKILEEYKA
LIAKIFEFLEILRNPDRLTEVVREELIAVKEEYGDARRTEIDHAYLDLDEEDLIAVEDRI
VTLSQDGYIKTQPLSDYRAQKRGGRGKSATAMKEEDEVGQILVASTHDMLLCFSNRGKLY
WKKTWQLPLAGRGARGKPIVNVFPLEAGESISSILPVSEFDDSHFVFMATKHAIVKRVKL
ADFSRPRANGIIALDLLDGDELVGTALTYGEQDVMLFADGGKAIRFDENDVRVMGRQARG
VRGMKLAEGQAVMSMQIAQANTLILTATEHGFGKCTPVEDYSTINRGGQGVISIKTTDRN
GKVVAAVAVTPDQEVVLITNKGTLVRTRVAEISVVGRNTQGVKLINVGSDEWVVGLAVVN
MSDDEDENIEPTDENPAPTLTATDDESTQQQENEQ
NT seq 2628 nt   +upstreamnt  +downstreamnt
atgtcggaatttgcacgtgaaatacatcccatttccttagaagaggaaatgaaacaatcc
tatttaagttatgccatgagtgtcatcattgggcgcgccttacctgatgtgcgagatggt
ttaaaaccggtacatcgtcgtgtgttgtttgcgatgaatgaattgcataacgattacaat
aaaccttataaaaaatcggcacgtgtggtcggtgacgtaattggtaaatatcacccccat
ggagatacggcggtttacgacaccattgttcgtatggcgcaacccttttcgttacgctat
atgttggtggatggtcaaggtaactttggctcgattgatggcgataatcctgctgcgatg
cgttacaccgaagtgcggatggccaaaatcgcccatgaattattggcagaccttgataaa
gaaactgttgattttacgcctaactatgatggttctgaatctgaaccgaatgtgctgcca
agtcgcatccctaaccttttagtcaatggttcagctggtattgcggtgggtatggcgact
aacattccaccgcataacctaactgaaacaattaatgcctgcttagcctacattgaaaac
cctgatattgatgtcgccggcttaattgaacacatgccaggcccagattttccaacctat
ggcattatcaatggcacgcggggcatacgtgaagcctatgagaccgggcgtggtcgggtg
caaattcgcgctaaaacccaaattgaaaccgataagtctggtaagcaagcgatcatcgtt
aacgaaatcccttatcaggttaacaaggccaagttgatcgagcggattgccgagctgatt
aaagaaaagaaaattgacggcatcaccgcattacgtgatgagtcggacaaagatgggatg
cggattgtgattgaattgcgtcgcggtgaaaacgctgatgtgatgattaataatctttat
aagttaaccgctatgcaaaccgtgtttggtatcaacatggtggcgctgattaatggtcaa
cctaagttgctcaatctgcaacaaataattcaagcctttgtgcgccatcgccgtgaagtg
gtgacacgccggactattttcgaactacgcaaagcacgtgaaaaagcccatttgctcgaa
ggtttagcggttgccttgagtaacatcgatgaaatgatcgaactgatcaagtcctctgca
acctcacaaatcgccaaagagcggatgcttgaacgtgattggcctgccgggcatgtcctg
caattattagaacgtgtagaagcaaatgatacccgcccagaagatttagcggctggtttt
ggaatggtctcggcagatagctaccgtctatcaccggtgcaagcacaagccatcttggat
atgcgtttgaatcgcctaaccgggttagagcaagacaaaattcttgaagaatataaggcg
ctgattgcgaagatttttgaattcctggagattttgcgcaatccggatcgcttaaccgaa
gtggtacgtgaagaactgattgcggttaaagaagaatatggcgacgcccgtcggactgaa
attgatcacgcgtatttagacttggacgaagaagacttgattgcggttgaagaccgaatt
gtcacgctttctcaagatggttacattaaaacccagcctttaagtgattatcgcgcccaa
aaacgcggaggccgcggtaagtcggccactgcgatgaaagaagaggatgaagtgggtcag
attttggtcgccagcacccacgatatgttgttgtgtttctctaatcgcggcaagttgtat
tggaaaaaaacctggcagctgcctttagcagggcgcggtgcccgtggcaaacccatagtg
aatgtcttcccattagaagcaggtgaaagcatttcatccattttgccggtcagtgaattt
gatgacagtcactttgtatttatggctaccaaacatgcgatcgtgaaacgagtcaagcta
gccgatttttcacgtcctcgtgctaatggcattattgcactcgatttactcgatggcgat
gaattagttggcacggccttaacctatggtgaacaagacgtgatgttgtttgcggatggt
ggcaaagcaatacgttttgatgaaaatgatgtccgcgtcatgggacgtcaggcacgcggc
gtgcgaggtatgaagctggctgaaggccaagccgtcatgtcgatgcaaatcgcacaggct
aacaccttaattttaacagcgactgaacatggttttggcaagtgtacacctgttgaagat
tactcgacgattaatcgcggtggccaaggggttatttcgattaaaaccactgatcgtaat
ggtaaggtagtagcggccgtagcggtcacgccagatcaggaagtggtgttgattactaat
aaaggcactttggttagaacgcgtgtggcggaaatatccgtggttgggcgcaatacccaa
ggggtgaaactgattaatgtcgggtccgatgagtgggtggttgggcttgctgtggtcaat
atgtctgatgatgaagacgaaaacatagagccaacagatgaaaaccctgctccaacctta
accgcaacagatgatgaatccacgcaacaacaggaaaatgaacaataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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