KEGG   Tolumonas auensis: Tola_3016
Entry
Tola_3016         CDS       T00904                                 
Name
(GenBank) exoribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
tau  Tolumonas auensis
Brite
KEGG Orthology (KO) [BR:tau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tau03016]
    Tola_3016
Enzymes [BR:tau01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Tola_3016
Transfer RNA biogenesis [BR:tau03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Tola_3016
SSDB
Motif
Pfam: RNB OB_RNB CSD2 S1 Rho_RNA_bind
Other DBs
NCBI-ProteinID: ACQ94605
UniProt: C4LD74
Position
complement(3303319..3305379)
AA seq 686 aa
MFQDNPLLAQLKQQLRDNLPKKEGVVRASDRGFGFLETDHRGESYFIAPQQMKRVMHGDR
IIAVIRAENGKEQAEPESLVTPFLTRFVARIKVIKDRLFVVPDHPVMKDAIKARPMKGLD
EKQFKEGDWVIANLKRHGMSDASGHFAEITEYVTHNNDPEAPWWVVLRRHDLPRCAPDIE
QEWQLREEGLTREDLTALPFVTIDGESTRDMDDALYVEKTADGWKMLVAIADPTAYIEPG
SALDLEAAKRAFTVYLPGRNIPMIPRHLSDELCSLHEGEERPALCCEMLITAAGELLPEP
RFFAANIRSQGRLIYDQLSDWLENGSAEGFDPAPVIVEQIELLHAATTARQTWRKEHAIL
FKDRPDYDFELNEAGEVVAIHASFRRSANKIVEESMIAANQCAGDFLAAQPGYGIFNVHA
GLDVEKFKGVQELLQLHEAPLTDETLLTLPGFCQLRHWLDAQPTSYLDNRIRRFQTYSLM
SAEPGPHFGLGLSHYATWTSPIRKYGDMINHRILKAIISQQEVPVRADAALTDALSLSRR
SNRMAERDIGDWLYARFLLPAVASQQVFDAEIMDVMRSGLKVRLLENGAVCFIPGSLILK
DRKRFVCNHDEGRAYLDGEIHYELGQTIQVKLQDAIEATRTLVAIPTELPSAAAPVTKEV
LAESEHELMDELLTEPEETAPEEDEA
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgtttcaagataacccgttactggcgcagctcaagcagcagcttcgcgacaatctgccg
aaaaaagaaggggtcgttcgcgcctctgaccgtggcttcggctttctggaaaccgatcac
cggggtgaaagctacttcattgcaccacagcagatgaagcgagtaatgcacggtgaccgg
attatcgccgtcatccgcgctgaaaatggtaaagaacaggctgagccggaatcactggtc
accccgttcctgacccgcttcgtggcccgcattaaagtgatcaaagatcgcctgttcgtg
gtgccggaccatccggtcatgaaagacgcgatcaaagcacgcccgatgaaaggactggat
gaaaagcagttcaaagaaggcgattgggtcattgccaatctgaaacgtcacggcatgagt
gatgccagtggccatttcgctgaaattaccgaatatgtgacgcataacaacgatccggaa
gcgccgtggtgggtggtgttacgtcgccatgatctgccgcgttgtgccccggacattgag
caggaatggcaactgcgtgaggaaggtctgacccgtgaagatctgactgcgctgccgttt
gtcactatcgacggtgaatcgacccgcgatatggacgatgccttatatgtagaaaaaacc
gctgacggctggaaaatgctggtggcgattgccgatccgaccgcgtatatcgagccgggt
agtgcgctggatctggaagccgcaaaacgcgcgtttaccgtctatctgccgggccgcaac
attccgatgatcccgcgtcacttgagtgacgagctgtgttcactgcatgaaggtgaagag
cgtccggcactgtgctgtgaaatgctgatcacggcagccggtgagctgttaccggagccg
cgtttctttgccgcgaatatccgctcacaaggtcgtctgatttatgatcagctgtccgac
tggctggaaaacggcagtgcagaagggttcgatccggcaccagtcatcgtcgaacagatc
gaactgttgcacgcggcaaccaccgcgcgtcagacctggcgcaaagagcacgccattctg
tttaaagaccgtccggactacgatttcgaactgaacgaagccggtgaagtggtggcgatc
cacgcctcattccgccgcagtgcgaacaagatcgtggaagaatcgatgattgccgccaac
cagtgcgccggtgatttccttgccgctcagccgggttatggcattttcaacgtgcatgcc
ggtctggatgttgagaaattcaaaggcgtgcaggaattactgcagctgcacgaagcgccg
ctgactgacgaaacgctgctgacgctgccgggcttctgccagttgcgtcactggctggat
gcgcaaccaaccagctatctggacaaccgtatccgtcgtttccagacctactcgctgatg
tcggcggaaccgggcccgcatttcggcttaggtttgagccattacgcgacctggacgtcc
ccgatccgtaaatacggcgacatgatcaaccaccgcatcctgaaggcgattatcagccag
caggaagtgccagtgcgtgccgatgccgcgctgaccgatgcgttgagtctgtcacgtcgt
agcaaccgcatggcggagcgcgatatcggcgactggttatatgcccgcttcctgttaccg
gccgtggcttcacagcaggtatttgatgcggaaatcatggatgtgatgcgcagtggtctg
aaagtgcgtctgctggaaaatggtgccgtgtgcttcattccgggcagcctgatcctgaaa
gaccgcaagcgtttcgtctgcaaccatgacgaaggccgggcttatcttgatggtgaaatt
cactacgagttaggtcagaccattcaggtgaaattgcaggatgcgatcgaagcaacccgc
acgctggtggcgatcccaaccgagttgccgtctgcggcagcaccggtcacgaaggaagtg
ctggcagaatccgagcatgaactgatggacgaactgctgacggaaccggaagaaacggca
ccggaagaagatgaagcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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