KEGG   Thermococcus barophilus: TERMP_00164
Entry
TERMP_00164       CDS       T01377                                 
Name
(GenBank) exosome complex exonuclease 2
  KO
K12589  exosome complex component RRP42
Organism
tba  Thermococcus barophilus
Pathway
tba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TERMP_00164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tba03019]
    TERMP_00164
Messenger RNA biogenesis [BR:tba03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     TERMP_00164
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     TERMP_00164
SSDB
Motif
Pfam: RNase_PH RNase_PH_C SRP54_N
Other DBs
NCBI-ProteinID: ADT83141
UniProt: F0LHQ7
Position
131085..131897
AA seq 270 aa
MEVMASIMKDHIVELLKEKKRIDGRSLEDLRPLEVKVNVIEKAEGSAWVKLGNTQVLVGI
KLDLGEPFPDLPDKGVMTTNVELVPLASPTFEPGPPDERAIELARVVDRGIRESQAIDLE
KLVIIPGKLVRVVFIDVHVLDHDGNLVDATGIGAIAALLSTKMPKIEYNEETGEVMMLDE
YEPLPVTKIPIPVSFAKIGGTIVVDPNLEEEHVMDGKLTITTDENGYISAVQKSEGGSFK
LEEVMYAVDVAFKKAQEIREKILEAVGKKE
NT seq 813 nt   +upstreamnt  +downstreamnt
atggaagttatggcttcaattatgaaagatcacatcgttgagctcttaaaagagaaaaaa
agaattgatggaaggagtctggaagatttaagacctcttgaagtgaaggtaaatgtcatc
gaaaaagcggaaggttcagcatgggtcaagctcggcaatactcaggttcttgttggaata
aagcttgatttgggtgagccattcccagacctgccggataaaggtgttatgacaacgaac
gttgagctcgttccgttggcttccccgacatttgagcctggtcctccagatgagagagca
attgagctggcaagagttgttgacagaggaataagggaaagccaagcaattgacttggag
aagcttgtcattatccccggaaagctcgttagggttgttttcattgacgtccatgtcctt
gaccacgatgggaaccttgtagatgccactggaattggggcaatagcagctctcttgagc
acaaagatgccaaaaattgagtacaacgaggagactggcgaagttatgatgcttgatgag
tatgagccattgcccgtaactaagattccaattccagtgagctttgctaagattggggga
acaatagtcgttgacccaaatcttgaagaggagcatgtaatggatggaaaattaacaata
acaacagatgagaatggttacatatcagcagtgcagaagagtgagggtggaagctttaag
cttgaagaagtcatgtatgcagttgatgttgcattcaagaaagctcaggagattagagag
aagatccttgaggctgtaggaaagaaggagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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