KEGG   Thermococcus barophilus: TERMP_00409
Entry
TERMP_00409       CDS       T01377                                 
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
tba  Thermococcus barophilus
Brite
KEGG Orthology (KO) [BR:tba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tba03016]
    TERMP_00409
Enzymes [BR:tba01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     TERMP_00409
Transfer RNA biogenesis [BR:tba03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TERMP_00409
 Prokaryotic type
    TERMP_00409
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ADT83386
UniProt: F0LJ40
Position
338102..338902
AA seq 266 aa
MRIALKIAYDGSKFYGFQRQPGLRTVEGEIIRVLQKLDVIESPENANFKGASRTDRGVSA
LGNVIAFNTENPKLAQPRVLNHHLRDIWVLGVAQVSDDFHPRFWAKSKIYRYYLVDEGFD
VNAMKECARLFVGTHDFSAFARVEKFKDPIREVNRLEIIPRGDLIIIEIEGKSFLWEMVR
RIVTALKLCGFGIVETEDIRKMLEGRTDKKLPPSPPENLVLWEIKYENIIFQIDEYSLRK
IKQEFFERFSSFLVKAGMFKDWLSYL
NT seq 801 nt   +upstreamnt  +downstreamnt
atgaggattgcgttgaaaatagcatatgatggaagtaaattttatggattccagcgacag
ccagggttaagaaccgtggaaggcgaaataattagggttcttcaaaagcttgatgtaatt
gagtctccagaaaatgctaattttaaaggggcatcaaggacagataggggagttagtgcc
ttgggaaatgtgattgcatttaacacggaaaatccaaaattagcccagcccagagtttta
aatcatcatttaagagatatttgggttttaggagttgctcaagtttcagatgacttccac
ccgaggttctgggcaaagagcaaaatttaccggtactacttggttgatgaagggtttgat
gtaaatgcaatgaaagaatgtgccagacttttcgttggcacccatgatttttctgccttt
gccagggtagaaaagtttaaagaccccataagagaagttaacagacttgaaattatccca
aggggagatttgatcataattgaaattgaaggaaagagctttctctgggaaatggtgagg
agaattgtaactgcattgaaactgtgtggttttggtattgttgaaactgaagatatacga
aaaatgctggaaggaagaactgataaaaagcttcctccttcccctccagaaaatcttgtt
ctgtgggaaataaaatatgaaaatatcatctttcaaattgatgaatactcactcagaaag
attaaacaggagtttttcgaaaggtttagtagctttttggtcaaagctggcatgtttaag
gattggttatcttatttatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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