KEGG   Thermus brockianus: A0O31_00233
Entry
A0O31_00233       CDS       T04600                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
tbc  Thermus brockianus
Pathway
tbc03030  DNA replication
tbc03410  Base excision repair
tbc03420  Nucleotide excision repair
tbc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A0O31_00233
   03410 Base excision repair
    A0O31_00233
   03420 Nucleotide excision repair
    A0O31_00233
   03440 Homologous recombination
    A0O31_00233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tbc03032]
    A0O31_00233
   03400 DNA repair and recombination proteins [BR:tbc03400]
    A0O31_00233
Enzymes [BR:tbc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A0O31_00233
DNA replication proteins [BR:tbc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A0O31_00233
DNA repair and recombination proteins [BR:tbc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     A0O31_00233
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A0O31_00233
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N Taq-exonuc 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: APD08456
UniProt: A0A1J0LQA5
Position
complement(226032..228524)
AA seq 830 aa
MLPLFEPKGRVLLVDGHHLAYRNFFALKGLTTSRGEPVQGVYGFAKSLLKALKEDGDVVI
VVFDAKAPSFRHEAYGAYKAGRAPTPEDFPRQLALMKELVDLLGLERLEVPGFEADDVLA
ALAKKAEREGYEVRILTADRDLFQLLSDRIAVLHPEGHLITPGWLWERYGLRPEQWVDFR
ALAGDPSDNIPGVKGIGEKTALKLLKEWGSLENIQKNLDQVSPPSVREKIQAHLDDLRLS
QELSRVRTDLPLEVDFRRRREPDREGLRAFLERLEFGSLLHEFGLLESPQAAEEAPWPPP
EGAFLGFRLSRPEPMWAELLSLAASAKGRVYRAEAPHKALSDLKEIRGLLAKDLAVLALR
EGLGLPPTDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERALLAERLYENLLSRLKG
EEKLLWLYEEVEKPLSRVLAHMEATGVRLDVPYLRALSLEVAAEMGRLEEEVFRLAGHPF
NLNSRDQLERVLFDELGLPPIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELAKLK
GTYIDPLPALVHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFVAEE
GYLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTQTASWMFGLPAEAIDPLRRRAA
KTINFGVLYGMSAHRLSQELGIPYEEAVAFIDRYFQSYPKVKAWIERTLEEGRQRGYVET
LFGRRRYVPDLNARVKSVREAAERMAFNMPVQGTAADLMKLAMVRLFPRLPEVGARMLLQ
VHDELLLEAPKERAEEAAALAKEVMEGVWPLAVPLEVEVGIGEDWLSAKG
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgcttcccctctttgagcccaagggccgggtgctcctggtggacggccaccacctggcc
taccgtaacttcttcgccctcaaggggctcaccacgagccggggcgagcccgtgcaaggg
gtctacggcttcgccaaaagcctcctcaaggccctgaaggaggacggggacgtggtcatc
gtggtctttgacgccaaggccccctcttttcgccacgaggcctacggggcctacaaggcg
ggccgggcccctaccccggaggactttccgaggcagcttgccctcatgaaggagcttgtg
gaccttttggggctggagcgcctcgaggtcccgggctttgaggcggacgatgtcctcgcc
gccctggccaagaaggcggagcgggaagggtacgaggtgcgcatcctcaccgccgaccgg
gacctcttccagcttctttcggaccgcatcgccgtcctgcacccggaaggccacctcatc
accccggggtggctttgggagaggtacggcctgagaccggagcagtgggtggacttccgc
gccctggccggcgacccttccgacaacatccccggggtgaaggggatcggcgagaagacg
gccctgaagctcctaaaggagtggggtagtctggaaaatatccaaaaaaacctggaccag
gtcagtcccccttccgtgcgcgagaagatccaggcccacctggacgacctcaggctctcc
caggagctttcccgggtgcgcacggaccttcccttggaggtggactttagaaggcggcgg
gagcccgatagggaaggccttagggccttcttagagcggcttgagttcgggagcctcctc
cacgagttcggcctcctggaaagcccccaggcggcggaggaggccccttggccgccgccg
gaaggggccttcttgggcttccgcctctcccggcccgagcccatgtgggcggaactcctt
tccttggcggcaagcgccaagggccgggtctaccgggcggaggcgccccataaggccctt
tcggacctgaaggagatccgggggcttctcgccaaggacctcgccgtcttggccctgagg
gaggggctcggccttccccccacggacgatcccatgctcctcgcctacctcctggacccc
tccaacaccacccccgagggcgtggcccggcgctacgggggggagtggacggaggaggcg
ggggagagggccttgcttgccgaaaggctttacgagaacctcctaagccgcctgaaaggg
gaagaaaagctcctttggctctacgaggaggtggaaaagcccctttcccgggtcctcgcc
cacatggaggccacgggggtgaggctggacgtaccctacctaagggccctttccctggag
gtggcggcggagatgggccgcctggaggaggaggttttccgcctggcgggccaccccttc
aacctgaactcccgcgaccagctggaaagggtgctctttgacgagctcgggcttcccccc
atcggcaagacggaaaaaaccgggaagcgctccaccagcgccgccgtcctcgaggccctg
cgggaggcccaccccatcgtggagaagatcctccagtaccgggagctcgccaagctcaag
ggcacctacattgacccccttcccgccctggtccaccccaggacgggcaggctccacacc
cgcttcaaccagacggccacggccacgggccgcctttccagctccgaccccaacctgcag
aacattcccgtgcgcacccccttgggccaaaggatccgccgggccttcgtggccgaggag
gggtaccttctcgtggccctggactatagccagattgagctgagggtcctggcccacctc
tcgggggacgaaaacctcatccgggtcttccaggagggccgggacatccacacccagacg
gcgagctggatgttcggcctgccggcggaggccatagaccccctcaggcgccgggcggcc
aagaccatcaacttcggcgtcctctacggcatgtccgcccaccggctttcccaggagctg
ggcatcccctacgaggaggcggtggccttcattgaccgctatttccagagctaccccaag
gtgaaggcctggattgaaaggaccctggaggaggggcggcaaagggggtacgtggagacc
ctcttcggccgcaggcgctacgtgcccgacctcaacgcccgggtaaagagcgtgcgggag
gcggcggagcgcatggcctttaacatgcccgtgcagggcaccgccgctgacctgatgaag
ctcgccatggtgaggctcttccctaggcttcccgaggtgggggcgaggatgctcctccag
gtccacgacgagctcctcctggaggcgcccaaggagcgggcggaggaggcggcggccctg
gccaaggaggtcatggagggggtctggcccctggccgtgcccctggaggtggaggtgggc
atcggggaggactggctttccgccaagggctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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