KEGG   Thermobispora bispora: Tbis_2779Help
Entry
Tbis_2779         CDS       T01236                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tbi  Thermobispora bispora
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tbi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Tbis_2779
Enzymes [BR:tbi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Tbis_2779
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tbis_2779
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3255831..3256715)
Genome map
AA seq 294 aa AA seqDB search
MPELPEVEVIRRGLERWVAGRAIASAEVLHPRSVRRNTGDLPARLKGRPLLSAERRGKYL
WLPLGDGDPADPREAEEALVVHLGMSGQLLLTDRGAPAERHLRVRLGFADDGPELRFVDQ
RTFGHMLVAPLASAYGRRVPEPITHIAPDPLEEAFDDDGFAHRLTRRRTGLKRALLDQSL
ISGVGNIYADEALWRARLHWARATETLTAAEVTELLAQVRAVLTDAIAQGGTSFDSLYVN
VNGESGYFGRSLAVYGRQDEPCPRCGAPVRRDPFMNRSSYSCPKCQPWPGDARP
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagcttcccgaggtcgaggtcatccggcgcgggctggagcgctgggtggccggg
cgggcgatcgcgtccgccgaggtgctgcacccgaggtcggtccgccggaacacgggcgac
ctccccgcccggctcaagggccgcccgctgctctccgccgagcgccgcggcaagtacctg
tggctgccgctcggcgacggcgatccggccgatccgcgcgaggcggaggaggccctcgtc
gtccatctgggcatgagcgggcagctcctgctcaccgaccggggagcgccggcggagcgg
cacctgcgggtgcggctgggcttcgccgatgacggcccggagctgcgcttcgtcgaccag
cggacgttcggccacatgctcgtcgccccgctggcgagcgcctacggccgccgggtgccc
gagccgatcacgcacatagcccccgacccgctcgaggaggccttcgacgacgacgggttc
gcgcaccggctgacgcggcgccgtaccgggctgaaacgcgccctcctcgaccagtcgctg
atcagcggggtcggcaacatctacgccgacgaggcgttatggcgggcgcggctgcactgg
gcgcgggccacggagacgctgaccgcggccgaggtcaccgagctgctcgcccaggtccgg
gccgtgctgaccgacgcgatcgcgcagggcggcacgtcgttcgacagcctgtacgtgaac
gtcaacggggagagcggctacttcggccgctcgctcgcggtgtacggccggcaggacgag
ccgtgcccgcggtgcggcgcgccggtgcggcgcgacccgttcatgaaccggtcgtcctat
agctgcccgaagtgccagccgtggccgggcgacgcccggccgtga

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