KEGG T01013: Tb11.02.4580

Trypanosoma brucei: Tb11.02.4580

Entry

Tb11.02.4580 CDS T01013

Definition

DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tbr Trypanosoma brucei

Pathway

tbr03410	Base excision repair
tbr03420	Nucleotide excision repair
tbr03430	Mismatch repair
tbr03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tbr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tbr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tbr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:tbr03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_OB_2

Other DBs

NCBI-GI:

71755667

NCBI-GeneID:

3665837

UniProt:

Q384Z5

Position

AA seq 575 aa
MFRLVRPRRGLPFEPMALSTFDVFERAATAASPSGSSPQGPPYFVSPKHDGVRIVSYVPP
QAESTKSTCFSRFGRPIYGVTWIEEELRLLRWLSGDPRLVLDGELYIHRSHNPRTASSGA
TQTGFLAVSALVHRLRSAKSACSSEDEVLRYVASLPIMCVFDIVSLQPNERVKLGGDKSG
RGIPRIEKERLAILRGVMEANHISDLEMVRVIPNHSVFSQRLKALHFLASLLERARASST
LFPERMSSAVEECSGAEPVREPVPAYQGIGGKYVKLVPYTLITSLEEVRTVYLDKYLSTG
YEGAVVRSASNVYEIREKEKKVLQGLLDPLITSLKPSLFALHSRNESRRNGARVTGGTRL
LRVHSEGECVVTCDAPGATETDTSDGNKNGAGSDEAADHREIVEKVLRRAKTNGRRSPTA
AKLLPFADKEYAILRPLLKPPTADARSRSFLRIPVSSLHESLGVSAPRTPQGRAAMKGNN
SDTVIFYGVQCLSDTGRVFNVSLPKMNAENQQALLRHLLDVTGGRKGGGTPASGRTNKRS
LTGLYATVKYQSLTEYGVPRFGQVKGIRGGKGWFV

NT seq 1728 nt +upstreamnt +downstreamnt
atgttccgtcttgtaagaccccggcgtggtttgcccttcgagcccatggcattatcaacc
tttgatgtattcgagcgtgcggccactgcagcctcgccgtctggtagcagccctcaagga
cctccgtatttcgtctcaccaaagcatgatggggttcggattgtatcgtacgtgcctccc
caagccgagtcaacaaagtcgacgtgcttctcgcgctttggtcgccccatttatggggtg
acgtggattgaagaagaactgcggcttcttcggtggcttagtggtgacccgcgactggtc
ctcgatggtgagctttacatccaccgctcacacaacccgcgcactgcgtccagcggtgct
acccagacggggttccttgcggtctcagctctggtccaccgtctccggtccgcaaagtcc
gcttgttcttcggaagatgaagtgctcaggtatgtggcatcactccccatcatgtgtgta
tttgatattgtttcgcttcaacccaacgagagggtgaaactcggaggcgacaagagtggt
aggggaatcccacggatagagaaggaacggttggctatcttgcgcggggtcatggaggcc
aaccacatctccgacctggaaatggttcgtgttattcccaatcactccgttttctcgcaa
cgccttaaggcactgcattttcttgccagccttctggagcgggcacgggcttcctcaacc
cttttccctgaacggatgtctagcgcagtggaagaatgcagtggtgcggagcctgtacgc
gaacctgtgcctgcttaccagggtatcggcggcaagtatgtgaagctcgttccttacaca
ctgattacctcgcttgaagaggtccgaactgtgtatcttgacaaatacctctcaactggc
tacgagggtgctgtggttcgtagtgcatcaaacgtgtatgaaatcagggagaaggaaaag
aaggtacttcaaggcctgctggatcccttgattacttccttgaaaccttccctgtttgct
ctacatagtaggaatgagtcgaggcggaatggagcgcgtgtcacggggggcacacggctc
cttcgcgtgcactccgaaggcgagtgcgtggtcacctgcgacgctccgggtgcaactgaa
accgacacttccgatggaaataaaaatggagccgggagcgatgaagctgctgatcacagg
gaaattgtggagaaggtgcttcggcgagccaaaacgaatggccgccgcagtccaactgca
gcaaaactccttccgtttgcggacaaggagtacgccatcttgaggccccttctcaaaccc
cccacagcagacgcacggtcgcggagttttttgcgtatacccgtctcctcacttcatgaa
agccttggcgtttcggcgccgagaaccccgcaggggagggctgcaatgaagggtaacaac
agcgacactgtcatcttctatggggttcagtgccttagcgacacgggacgtgtattcaat
gtttccctgccaaaaatgaatgctgagaaccagcaagctctcttgcgacatctgctggat
gttactggcggccgcaagggtggcggaactccggcatcggggcgtactaataaacggtcg
ttgacaggtttgtacgcgactgtaaaataccagtcgcttacagagtacggcgttccacgg
tttggccaggtgaagggaatacggggtggcaaggggtggttcgtgtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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