KEGG   Tribolium castaneum (red flour beetle): 662987
Entry
662987            CDS       T01046                                 
Name
(RefSeq) exosome complex component rrp45
  KO
K03678  exosome complex component RRP45
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    662987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tca03019]
    662987
Messenger RNA biogenesis [BR:tca03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     662987
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 662987
NCBI-ProteinID: XP_974147
UniProt: D2A364
Position
LG4:complement(2907538..2909232)
AA seq 389 aa
MSKVRETLITNCERKFLMKCLSEWRRLDGRSFDEFRPLELKFGKQWGSCYVSLGNTKVLA
QTSCEIQQPKSSRPSEGILNINIELNPLAAPHFEAGRQSELSVQLNRLLEKCVKDSKAVD
LESLCIKTNEKVWALKVDINVLNHEGNILDCASIAMLASLTHFRRPDVTCDGEEFIIHSY
QQRDPIPTVIHHYPVCITYAIFNGGEYILADPSLLEEGSADAMLTIGLNGFKELCALHLG
GKAELAPSIILSTVSKATSRATVVIEEIKKSVKADTEQRQEKASVGFHTEDNFKTTLVFG
QSLDTWHTNKKKRNKKHKKAQPQSQNTVVIDKGSVEHVPQTENKKEVWDVDNNSDDDLII
VEKPKVQIELLTDSEEDDVVILGPVKNKK
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtcgaaagtacgggaaacacttattacaaactgtgaacgaaagtttttgatgaaatgc
ttgtcggagtggaggaggttagatggtcgaagttttgacgagttcaggccactagagctg
aaatttggcaaacagtggggttcctgttacgtttctctcggcaacacaaaagttttagct
caaacatcatgcgaaatccaacaacccaagtcttcacgacctagtgaaggaattctaaac
ataaatatcgagttgaacccactggcagcccctcatttcgaagcgggcagacagtcggaa
ttgtcagtgcagttgaaccgacttttggaaaaatgtgttaaagattctaaagctgttgat
ttggaatcattgtgcattaaaaccaacgaaaaagtatgggctttgaaggtggatattaat
gttttaaaccatgaggggaatattctggactgcgcctcgatcgccatgttggcttctttg
actcattttaggcgccccgatgtcacttgtgatggcgaagaattcatcattcacagttac
caacaaagggaccccattcctacggttatacaccactatccagtctgcataacatacgct
atttttaatggaggggagtatattcttgcggacccgtcactacttgaggaaggttccgca
gatgcaatgctaacaataggcctcaacggctttaaagaactgtgtgccctacatttaggg
ggaaaagctgaacttgcaccaagtattatcctgagtacagtttctaaagccacatctcga
gctactgttgtgatagaagaaataaaaaaatcagttaaggccgatactgaacaaaggcaa
gagaaggcttcggtaggctttcatactgaagataatttcaaaacaactctagtctttggc
cagagccttgatacatggcatacgaataaaaagaaaagaaataaaaaacataaaaaagca
cagccacaatcccagaatacggtcgttattgacaaagggtcagtggaacatgtgcctcag
accgaaaacaagaaagaagtctgggacgttgataataacagtgacgatgacttaataata
gtcgaaaaacctaaagttcaaatcgaactcctaacagacagtgaggaagacgatgtggtg
atactagggcctgtcaaaaataaaaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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