KEGG   Tribolium castaneum (red flour beetle): 663583
Entry
663583            CDS       T01046                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
tca  Tribolium castaneum (red flour beetle)
Pathway
tca03030  DNA replication
tca03410  Base excision repair
tca03420  Nucleotide excision repair
tca03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    663583
   03410 Base excision repair
    663583
   03420 Nucleotide excision repair
    663583
   03430 Mismatch repair
    663583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tca03032]
    663583
   03036 Chromosome and associated proteins [BR:tca03036]
    663583
   03400 DNA repair and recombination proteins [BR:tca03400]
    663583
DNA replication proteins [BR:tca03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    663583
  DNA Replication Termination Factors
   ELG1-RFC complex
    663583
Chromosome and associated proteins [BR:tca03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    663583
DNA repair and recombination proteins [BR:tca03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     663583
  Check point factors
   HRAD17(Rad24)-RFC complex
    663583
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_16 Mg_chelatase AAA_22 AAA_11 Gp44_lid AAA_24 AAA_30 DUF815 bpMoxR ResIII AAA_19 RuvB_N SLFN-g3_helicase AAA_7 ATPase_2 AAA_5 AAA_18 ADDB_N AAA_28 AAA_3 Kinesin
Other DBs
NCBI-GeneID: 663583
NCBI-ProteinID: XP_974716
UniProt: D2A2P4
Position
LG4:11445668..11448281
AA seq 355 aa
MQAFLKSGKLDNSDKSVPSSSKTSKKSKAVPWVEKYRPRTVSDVVEQSEAVSVLQQCISG
ADLPNLLFYGPPGTGKTSTILAAARQLFGDYYRDRILELNASDERGIQVIRDKVKTFAQL
TASGTRPDGKPCPPFKIVILDEADSMTHAAQAALRRTMEKESRSTRFCLICNYVSRIIEP
LTSRCTKFRFKPLNEAMILERLSFICGKENVECSDKTLAALVETSGGDMRRAITSLQSCA
KLKGSGVPISIDDVLEVTGVVPERWLKKFLDVCKTKDQNKLQAFLKEMMFEAYAASQILE
QLNQYIVNFEGFTDQQKAIIGQKLGVVSFKLQDGGSEFIQLLDLGCSIIRAFCNV
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgcaggcctttctcaagtcgggaaagttagataatagtgataaatcagtgccttcaagc
tcgaaaacatcaaaaaagtcgaaagccgtcccgtgggttgaaaaataccgtcctaggaca
gtctcggacgttgtggagcagagcgaggctgtttcagtgttacagcaatgtatttcaggg
gcggatctcccaaacttgttgttttatggtcctcctgggacaggcaaaaccagcacaatt
ctggcagctgcaagacagctttttggtgactattacagagacagaattcttgaactgaat
gcgtccgatgaacgaggaattcaagttattcgagacaaggtcaagacttttgcacaacta
actgctagcggtacaaggcctgatggtaaaccgtgtcctccgttcaaaatcgtcattttg
gatgaggcggactcgatgacacacgcagctcaagctgccttacgtcgaacgatggaaaaa
gagtctcgatcaaccagattttgtctaatttgtaactacgtgtcacggattatcgaaccg
ttgacatcacggtgtacgaaatttcgatttaaaccactgaacgaagctatgatccttgaa
cggttgagtttcatatgtgggaaagaaaatgtcgaatgtagcgataaaactttagctgcg
ttggttgagacaagtggaggcgatatgagaagagccattacttcattacagagttgtgcg
aaattgaaaggaagtggggttcctataagtattgatgacgtgttggaagtgaccggtgtt
gtgccagaacgttggttaaagaagtttttagatgtttgtaaaaccaaagatcaaaacaaa
cttcaagcgtttttgaaagaaatgatgtttgaagcatatgccgcctcacagattttggaa
cagctcaatcagtacattgttaattttgaggggttcactgaccaacaaaaggcgattatt
ggtcagaaactgggggttgtgagttttaaactgcaagacggtggttcggaatttattcaa
ctgttggatttggggtgttctataattcgagcattttgtaatgtgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (26)   
   Pfam (26)   
All databases (72)   

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