KEGG   Theobroma cacao (cacao): 18595992
Entry
18595992          CDS       T02994                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18595992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18595992
   03110 Chaperones and folding catalysts [BR:tcc03110]
    18595992
   03029 Mitochondrial biogenesis [BR:tcc03029]
    18595992
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tcc04147]
    18595992
Enzymes [BR:tcc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     18595992
Messenger RNA biogenesis [BR:tcc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     18595992
Chaperones and folding catalysts [BR:tcc03110]
 Heat shock proteins
  HSP60 / Chaperonin
   18595992
Mitochondrial biogenesis [BR:tcc03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    18595992
Exosome [BR:tcc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18595992
  Exosomal proteins of other body fluids (saliva and urine)
   18595992
  Exosomal proteins of breast cancer cells
   18595992
  Exosomal proteins of colorectal cancer cells
   18595992
  Exosomal proteins of bladder cancer cells
   18595992
SSDB
Motif
Pfam: Cpn60_TCP1 PhaC_N
Other DBs
NCBI-GeneID: 18595992
NCBI-ProteinID: XP_007024263
Position
6:complement(17944772..17950646)
AA seq 608 aa
MTSSFNALLYSSPAFPCSRTMDKKFLSSSGRLSSFDSISSSAIVGRKQNVILRRGHSSKI
WAMAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKFGSPKIVNDGVTVA
KEVELEHPVENIGARLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVQIT
KGIESTTKALVSELKMMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMGKVGRKGIVTLE
EGSGSENSMYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLIHVLE
DAIKEGYPIVIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGG
TVIRDEVGLSLDKAEKEVLGQAAKVVLTKETTTIVGDGSTQEAVNKRVAQIKNLVEAAEQ
DYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKASVEEGIVVGGGCT
LLRLAAKVDAVRETLDNDEQKVGADIVKRALSYPMKLIAKNAGVNGSVVIEKVLSSDNPN
YGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVVDIKEPEPAAAGNP
MDNSGYGY
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgacatcatctttcaatgccttgttgtatagctccccagcatttccctgcagtaggaca
atggacaaaaagtttttgagttcttcaggtcgactatcgtcatttgattctatatcttca
agtgccattgtaggcaggaaacagaatgtgattttacggagaggacactcttccaaaatt
tgggctatggccaaggagttgcatttcaacaaggatggttctgctattaagaagcttcaa
acaggtgttaacaaacttgctgacttagttggtgttactcttggtccaaaagggagaaat
gtagttttagagagcaagtttggctccccaaaaattgttaatgatggtgtcactgttgct
aaggaggttgagttggagcatcctgtggagaacattggtgctagattggtaagacaggct
gcttcaaagaccaatgatctagctggtgatggaacaaccacatcagttgttcttgcacaa
ggtttgataactgaaggtgttaaggtggttgctgctggtgcaaatcctgttcaaattaca
aaaggtattgaaagcactactaaggccctggtgtctgaacttaagatgatgtcaaaagag
gttgaagacagtgaactagcagatgtggctgccgttagtgcaggaaacaactatgaagta
ggcaatatgattgctgaagctatgggcaaggtgggaagaaaaggcatagtgactcttgag
gaaggcagcggttccgaaaacagcatgtatgttgtggaagggatgcaatttgaccgtggt
tatatctctccttactttgttacagacagtgagaaaatggctgttgaatatgaaaattgt
aagttactacttgttgacaaaaagataacaaatgcaagagatctcatccacgttttggaa
gatgctattaaagagggttacccaattgtaataattgcagaagatatcgagcaggaagct
cttgctactcttgttgtgaacaagctcagagggtcattaaagattgctgcactgaaagcc
cctggttttggagagcgcaaaagtcaatatcttgacgatattgctatactcactggaggt
actgtaataagagatgaggttggtttgtcattggacaaagctgagaaggaggtcctgggg
caagctgcgaaagtggtgctcactaaggagacaactacaattgttggtgatggaagcaca
caggaagcagtaaataagagagttgcccaaatcaagaaccttgttgaggcagcagagcag
gactatgaaaaagaaaagctcaatgaaagaattgcaaaactctcaggcggtgttgctgtt
attcaggttggtgcacaaacagaaacagaacttaaagaaaagaaattgagagtggaagat
gctcttaatgcaacaaaggcatctgttgaagaagggattgtagttggtggaggctgcacc
ttattgaggcttgcagctaaagttgatgctgtaagagagactcttgacaatgatgaacag
aaggttggagcagatattgttaaaagggcactgagctatccaatgaagttaattgccaag
aatgctggggtcaatgggagtgttgtcattgaaaaggtgctgtctagtgacaatcccaac
tatggttataatgctgcaactggaaaatatgaggatctgatggcagctggtattattgat
cctacgaaagtggtaagatgttgcttggagcatgcagcttctgttgcaagaacattcctc
acatcagatgctgtggttgttgacatcaaggaacctgaacctgcggctgctgggaaccct
atggataactcaggttatgggtactaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system