KEGG   Theobroma cacao (cacao): 18601229
Entry
18601229          CDS       T02994                                 
Name
(RefSeq) lysine--tRNA ligase, chloroplastic/mitochondrial
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    18601229
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tcc01007]
    18601229
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tcc03016]
    18601229
Enzymes [BR:tcc01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     18601229
Amino acid related enzymes [BR:tcc01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   18601229
Transfer RNA biogenesis [BR:tcc03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    18601229
 Prokaryotic type
   Other AARSs
    18601229
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-GeneID: 18601229
NCBI-ProteinID: XP_007032159
Position
4:complement(4358777..4376619)
AA seq 637 aa
MEGLRVWRLSSSIARPLSLRQPLGLGYSSCELVLCSNSGVVTATNTRLPSRDSRSFTFTS
TSTSNLEVACAIRLKKVEPLWSKGSQPYAYKWDRSYRLGSSSSDLVPCCSDGGAAATNTK
LHSRNRGSSTSTSTSDREAVRAIRLKKVEQLRSKGLEPYAYKWDRSHSARELQEIYKNLN
NGEELDSESHHVSIAGRIVARRAFGKLAFLTLRDHSSSIQLYCEKERLLNNQFEQLKTLV
DIGDILGASGSIKRTEKGELSVKVDSFAILTKSLLPLPDKYHGLTDIDKRYRQRYVDMIA
NPEVADLFRKRAKIVTEIRKTVESQGFVEVETPVLQGAAGGAEARPFMTYHNSLGRNLYL
RIATELHLKRMLVGGFEKVYEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMDMAEE
IVTRCALAVHGELTIDYQGVEIHLERPWRRETMHNLVKEATGIDFTEFENDLKVAKDVVM
KALGVGLDSKDKFSIEACPSLGHLLNEVFEIFVEPKLLQPTFVLDYPMEISPLAKPHRRH
AGLTERFELFICGRELANAFSELTDPLDQRARLEEQVRQHNKKRAEAVSVTDSMEEKDHK
NEDSMYEVTLDDDFLTALEYGMPPASGMAVPNDFVEV
NT seq 1914 nt   +upstreamnt  +downstreamnt
atggagggcttgagggtgtggaggctaagctcatcaattgcaaggccgttaagtttaagg
caaccacttggattgggttattcttcctgtgaactagtcctttgctcgaatagcggcgtt
gtcaccgccaccaacaccaggctgccctctcgcgatagtcggtcttttacattcacttca
acctccacttcgaatcttgaagttgcttgtgccatccgcctgaaaaaggtggaaccattg
tggagcaaagggtcgcaaccttatgcttataagtgggatagaagttatagattgggctct
tcttcctctgatctagtcccttgctgctcagatggcggcgctgccgctaccaacaccaag
ctgcactctcgcaatcgtgggtcttcgacttcgacttccacttcagaccgtgaagccgta
cgtgctatccgtttgaaaaaggtggaacaattgcggagcaaagggttggagccgtatgcg
tataagtgggatagaagtcacagtgctagggagttgcaagaaatatataagaatctaaat
aacggtgaagagttagatagtgagagtcatcatgtctctattgcaggcagaattgttgct
cgcagagcctttggaaagcttgcttttctcactttaagagatcactccagcagtattcag
ctttactgtgagaaggaaaggcttttgaataatcagtttgagcagttaaagacacttgtt
gatattggtgatatattaggtgcatctggctctatcaagcggactgagaaaggggagctt
tctgttaaggtggattcttttgcaattcttacaaaatctctgcttccgttgcctgacaag
tatcatggtctaactgacattgataagcgttatcgtcaaaggtatgttgatatgattgca
aatcctgaagtagctgatttattccggaaacgagcaaagattgtgacggagatacgaaag
acggtggaatctcagggttttgttgaagttgaaactccagttctgcagggagcagctggc
ggggctgaagcaagaccattcatgacataccataactcccttggaaggaacctttatcta
agaattgcaactgaacttcacttgaagagaatgctggttggaggatttgaaaaagtatat
gagattggtcgtatattcagaaatgaaggcatttcaactcgtcataatccagaatttacg
accatagagatgtatgaggcatattcagactacgaatctatgatggacatggctgaggaa
attgttacccgatgtgctcttgcagttcatggagagctcaccattgattaccagggggtt
gagatacatttggagaggccatggaggcgggaaaccatgcacaatcttgttaaagaagcc
actgggattgatttcactgaatttgaaaatgatcttaaagttgctaaagatgttgttatg
aaggcactgggagttgggcttgatagtaaggacaagttttccattgaagcctgcccttca
cttggccaccttcttaatgaggttttcgaaatttttgttgaaccaaagctcctgcaacct
acatttgttttggactatcccatggaaatatctcctcttgccaaaccacaccggaggcat
gcaggtttgactgagagatttgaactcttcatatgtggtcgtgaactggctaatgcattc
tctgagttaactgatcctttggaccagagagcccgcctggaagagcaagtaaggcaacat
aacaagaagagagcagaagctgtttcagtcacagatagtatggaagaaaaagatcataaa
aatgaagactctatgtatgaagtgactcttgatgatgattttcttactgctttggaatat
ggaatgcccccggcttcaggaatggctgttcctaacgattttgttgaggtctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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