KEGG   Theobroma cacao (cacao): 18604523
Entry
18604523          CDS       T02994                                 
Name
(RefSeq) uncharacterized LOC18604523
  KO
K14315  nucleoporin NDC1
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    18604523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18604523
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     18604523
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 18604523
NCBI-ProteinID: XP_007037111
Position
3:complement(18337812..18350166)
AA seq 489 aa
MHSAESGMVVKNRLVEFLIWQSIPSSLIFLVFTAMIVSGRSPAAIFISFLSFHLSQLLFS
VSLSAVSSPERKFGRSLPVMLGAAAVSGYVSAVSLCGVNGRVGFKGFASGLFYAFFYIYK
RRWVLHFPIIQRSPFFSFKMGIPSAITRALKLSAAAYLFSALLLVFLPHHFNTELELGNL
FAQHVISYSVSFSLFLCWELAHHLQQVLHTKRFIFAPPKGSAAAETNPSEPLLAALEESS
PTSLLKYLAYLDLCMVCENNVDYWRRAAFFEETGETYRRVAAVCLRPLEQLASKLGEGLE
GSSDGKAYRVSDQLQSSTDPRMNSKCYELMNNFQLYTWSARTIASLTAHSHKEDRFGVAQ
LSGSNAAVISTLIACLLAVETFMGKKSSLQPSPHLMGPAGIKWATSSIGRRDVRTGKRRD
GPLYSKAYAMADVLRTSIYCIVSAFHNEMLTNAKAGLLEKDWISSGKPPFGTRELLLQKL
LLFLDFQAS
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgcattcagcggagtcaggcatggtagtgaagaatcggttggtagagttcctaatatgg
cagtccattccaagtagtttaattttcttggttttcaccgcaatgatcgtctctgggcgc
tcccccgctgcgatcttcatctcctttttgagctttcatctctcccagctgctcttctct
gtctccctctcagccgtctcatctcccgagcgtaaatttggacgcagtttgccggttatg
ctgggagccgcggccgtgtcgggttatgtctcggcagtgtccctttgtggagtgaatggg
agagtggggtttaagggttttgcttccgggttgttctatgccttcttttatatatataag
cggagatgggtattgcattttcccattattcagcgttcccctttctttagcttcaagatg
gggatcccttccgctatcacacgagcattaaagctttctgctgcagcttatctattttca
gctctgctgttggtatttctgccacaccattttaacactgaactcgagctgggaaacttg
tttgctcaacatgtaatctcttattctgtcagcttttctctgtttctctgttgggaatta
gctcatcatttacaacaggtgctacatacaaaaaggttcatattcgcaccacccaaagga
tcggcagcagcagaaacaaatccaagtgagcctctcctggctgcattagaggagagttct
ccaacttcccttctgaaatatcttgcataccttgatctatgtatggtttgtgagaataat
gttgactattggcgtcgagctgccttctttgaagaaactggtgagacttacagaagagtt
gcagctgtatgcttgcggcctttggagcagcttgcatcaaaattgggcgaaggtttggaa
ggttcttcagatggtaaagcctaccgagtatctgaccagttgcagtcatcaactgaccca
cgaatgaattcaaaatgctatgaactaatgaacaacttccagctttacacatggtctgct
cgaacaattgcatccttgactgcacactcacataaagaagacagatttggagttgctcaa
ctctctggtagcaatgctgctgttatctcgacactcatagcttgcctgcttgctgttgaa
acattcatgggaaaaaaatcaagtttgcaaccatctccgcatttgatgggcccagctggc
attaaatgggctacatcgagtattggaagaagagatgttagaacaggtaaaaggagagac
ggtccactttattcaaaagcatatgccatggctgatgttttaaggacgtcaatttactgc
attgtgtctgcttttcacaacgagatgctgactaacgccaaagctggccttcttgagaag
gattggattagtagtggcaaacctccttttggaactcgcgagctgctgttgcagaaattg
cttctttttcttgactttcaagccagctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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