KEGG   Thauera chlorobenzoica: Tchl_1744
Entry
Tchl_1744         CDS       T04612                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
tcl  Thauera chlorobenzoica
Pathway
tcl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tcl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tchl_1744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcl03021]
    Tchl_1744
   03400 DNA repair and recombination proteins [BR:tcl03400]
    Tchl_1744
Enzymes [BR:tcl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Tchl_1744
Transcription machinery [BR:tcl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Tchl_1744
DNA repair and recombination proteins [BR:tcl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Tchl_1744
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 UbiD
Other DBs
NCBI-ProteinID: APR04598
UniProt: A0A1H5Z855
Position
1878579..1882712
AA seq 1377 aa
MAYSYTEKKRIRKSFAKRAAVLDAPFLLATQIESFAEFLQAETLPDVRHNQGLQAAFTSI
FPISSHSGNARLEFVQYMLGEPAFDVKECQQRGLTFASPLRARVRLVIMDREAPKETIKE
VKEQEVYMGEIPLMTTTGSFVINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARI
IPYRGSWLDFEFDPKDYLYFRVDRRRKMPVTILLRAIGLTPEEILATFHDTDTFHLQSDG
AQFELVPERLRGEVARFDITTADGKIIVAREKRITSKHIREIDQAGVKTMAVPDDFLLGR
VIANNVADPATGEVLARANDEITEDLLDKLRLAGITELSTLYINDLDRGAYISQTLRIDE
TADQWAAKVAIYRMMRPGEPPTEDAVEGLFNGLFYAEERYDLSSVGRMKFNRRAYPEKID
DKAPGWLKRFYERVGAQGEDGPGVLVNEDILAVIGVLVELRNGRGEIDDIDHLGNRRVRS
VGELAENQFRAGLVRVERAVKERLSQAESDNLMPHDLINAKPISAAIKEFFGSSQLSQFM
DQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSL
AVYARTNRHGFLETPYRKVNDGKVTDQIDFLSAIEEGQYVIAQANAEIDAAGMLAGDLVS
CRHKGEFLLATSDQVQYMDVAPGQIVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRP
EKPLVGTGIERRVAVDSGTAVQATRGGIVDYVDANRIVIRVNDDETLAGEVGVDIYNMIK
YTRSNQNTNINQRPVVRVGDRIARGDVVADGASTDLGELALGQNMLVGFMPWNGYNFEDS
ILISERVVADDRFTSIHVEELTVVARDTKLGPEEITRDIASLGEAQLSRLDESGIVYIGA
EVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMVGTVIDVQVFT
REGIERDKRAQSIIDDQLRSFKTDLADQMRIVERDAFARIRRMIVGQKANGGPKKLAKGS
ELTDAYLDGLELYHWFDIRLADETLAVQLEAVREGLENTRKDFEQAFEIKKKKLTQGDEL
PPGVQKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSKIVPVEDMPYMEDGTPLDIVLNPLG
VPSRMNIGQILETHLGWAAKGLGQKIDKMLQAKASADELRGLLDQIYNSSGKAEDLAGFS
DEDVADLAFNLKKGVPFATPVFDGAKEEEIRQMLELAGLPVGGQVTLYDGRTGEAFERQV
TVGYKHVLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAY
TLQEMLTVKSDDVTGRTKVYENIVKGEHKIDSGMPESFNVLVKEIRSLAIDIDLDRN
NT seq 4134 nt   +upstreamnt  +downstreamnt
atggcgtattcctacaccgaaaagaaacgtatccgcaagagcttcgccaagcgcgcggcc
gtgctcgatgcgcctttcctgctcgccacccagatcgagtcgtttgccgagttcctgcag
gcggaaaccctgccggacgtacggcacaaccagggtctgcaggccgcgttcacctcgatt
ttcccgatctcgagccatagcggcaatgcccgcctcgaattcgttcagtacatgctgggc
gagccggccttcgacgtgaaggaatgccagcaacgcgggctgaccttcgcttcgccgctg
cgcgcgcgcgtgcgcctggtcatcatggaccgcgaggcgccgaaggaaaccatcaaggaa
gtcaaggagcaggaggtgtacatgggcgagattccgctcatgaccaccaccggctccttc
gtcatcaacggcaccgagcgcgtcatcgtgtcgcagctgcaccgttcgccgggggtgttc
ttcgagcatgaccgtggcaagacgcactcctcgggcaagctgctgttctcggcgcggatc
atcccctaccgcggttcctggctggatttcgaattcgacccgaaggactacctgtatttc
cgcgtcgaccgccgccgcaagatgccggtgacgatcctgctgcgcgcgatcggcctgaca
ccggaagagatcctggcgaccttccacgacaccgataccttccacctgcagtccgatggc
gcccagttcgagctcgtgcccgagcgcctgcgcggtgaagtggcccgtttcgacatcacc
accgccgacggcaagatcatcgtcgcgcgtgaaaagcgcatcacctccaagcacatccgc
gagatcgaccaggccggggtgaagaccatggcggtgccggacgatttcctcctcgggcgc
gtgatcgccaacaacgttgccgacccggcgaccggcgaagtgctggcgcgtgccaacgac
gaaatcaccgaggacctgctcgacaagctgcgcctggccgggatcaccgagctgagcacg
ctgtacatcaacgacctcgatcgcggtgcctatatctcgcagaccctgcgcatcgacgaa
accgccgaccagtgggccgccaaggttgccatctaccgcatgatgcgcccgggcgagccg
cccaccgaggatgccgtggaaggcctgttcaacggcctgttctacgccgaggagcgttac
gacctgtcgtccgtcgggcggatgaagttcaaccgccgcgcctacccggaaaaaatcgac
gacaaggcgccgggctggctcaagcgcttctacgagcgcgtcggcgcgcagggcgaggac
ggcccgggcgtgctggtgaacgaggacatcctcgcggtgatcggtgtgctcgtcgaactg
cgcaacggccgcggcgagatcgacgacatcgaccacctcggcaaccgccgcgtgcgttcg
gtcggcgaactggccgagaaccagttccgcgccggcttggtgcgggtcgagcgcgcggtc
aaggagcggttgagccaggctgagtccgacaacctgatgccgcacgacctgatcaacgcc
aagccgatcagcgccgcgatcaaggagttcttcggctccagtcagctgtcgcagttcatg
gaccagaccaacccgctgtccgagatcacccacaagcgccgcgtctcggcgctgggcccg
ggcggcctgacccgcgagcgcgccggtttcgaggtgcgcgacgtgcacccgacgcactac
ggccgggtgtgcccgatcgagaccccggaaggtccgaacatcggcctgatcaactcgctc
gcggtgtatgcgcggaccaaccgccacggcttcctcgagacgccttatcgcaaggtcaac
gacggcaaggtcaccgaccagatcgatttcctctccgcgatcgaggaaggccagtacgtg
atcgcccaggccaacgccgaaatcgatgccgccggcatgcttgcgggtgacctggtgtcg
tgccgccacaagggcgaattcctcctcgccacttcggaccaggtccagtacatggacgtg
gcgccgggccagatcgtgtcggtggcggcgtcgttgattccgttcctcgagcacgacgat
gccaaccgcgcactgatgggcgcgaacatgcagcgtcaggccgtgccctgcctgcgcccg
gaaaagccgctggtcggtaccggcatcgagcgccgcgtggcggtcgactcgggcaccgcg
gtgcaggccacccgcggcgggatcgtggactacgtggatgcgaaccggatcgtgatccgg
gtgaacgacgacgagaccctggcgggcgaagtcggcgtcgacatctacaacatgatcaag
tacacccgctccaaccagaacaccaacatcaaccagcgtccggtggtgcgggtgggcgac
cgtatcgcccgcggcgacgtggtggccgacggtgcctcgaccgacctcggcgagctggcg
ctgggccagaacatgctggtcggcttcatgccgtggaacggctacaacttcgaagactcg
atcctgatctccgagcgcgtcgtcgccgacgaccgcttcacctcgatccacgtcgaagaa
ctcaccgtcgtcgcccgcgacaccaagctcggacccgaggagatcacccgcgacatcgcc
tccctcggtgaagcgcagctgtcgcgcctggacgaatccggcatcgtctacatcggcgcc
gaagtcgaggccggtgacgtgctggtgggcaaggtcacgccgaagggcgagacccagctc
acaccggaagaaaagctgctgcgcgcgatcttcggcgagaaggcctccgacgtgaaggac
acctcgctgcgcgtgccctcgggcatggtcggcaccgtcatcgacgtgcaggtgttcacc
cgcgaaggcatcgagcgcgacaagcgcgcgcagtcgatcatcgacgaccagctgcgcagc
ttcaagaccgatctcgccgatcagatgcggatcgtcgagcgcgacgccttcgcccggatc
cggcgcatgatcgtcggccagaaggccaacggcgggccgaagaagctggccaagggcagc
gagctcaccgatgcctacctcgacggcctcgagctctaccactggttcgacatccgcctc
gccgacgagactctggcggtgcagctcgaagcggtgcgcgaaggcctggagaacacccgc
aaggacttcgagcaggcgttcgagatcaagaagaagaagctcacccagggcgacgagctg
ccgccgggcgtgcagaagatggtcaaggtctacctggccgtcaagcgccgcctgcagccg
ggcgacaagatggccggccgtcacggcaacaagggcgtggtgtcgaagatcgttccggtc
gaggacatgccctacatggaagacggcaccccgctcgacatcgtgctcaacccgctcggc
gtgccgtcgcggatgaacatcggccagatcctcgagacccacctcggctgggcggcgaag
gggctggggcagaagatcgacaagatgctgcaggcgaaggcttcggccgacgaactgcgc
ggccttctcgaccagatctacaacagcagcggcaaggccgaggatctcgccggcttctcc
gacgaggacgtggcggacctggccttcaacctcaagaagggcgtgccgttcgcgactccg
gtgttcgacggcgcgaaggaagaggagatccgccagatgctcgagctcgccggtctgccg
gtggggggccaggtcacgctgtacgacggccgcaccggcgaagccttcgagcgccaggtc
acggtcggctacaagcacgtgctcaagctgcaccacctggtcgacgacaagatgcacgcc
cgctccaccggcccgtactcgctggtgacccagcagccgctgggcggcaaggcgcagttc
ggcggccagcgtttcggcgaaatggaagtgtgggcgctggaagcgtatggtgcggcgtac
acgctgcaggagatgctcacggtcaagtcggacgacgtgaccggccggaccaaggtgtac
gaaaacatcgtcaagggcgagcacaagatcgattccgggatgccggagtccttcaacgtg
ctggtgaaggaaatccgctcactcgcgatcgacatcgatctcgaccgcaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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