KEGG T01127: Tcur

Thermomonospora curvata: Tcur_1208

Entry

Tcur_1208 CDS T01127

Definition

DNA polymerase LigD, ligase domain-containing protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tcu Thermomonospora curvata

Pathway

tcu03410	Base excision repair
tcu03420	Nucleotide excision repair
tcu03430	Mismatch repair
tcu03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tcu03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tcu03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tcu03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:tcu03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2

Other DBs

NCBI-GI:

269125459

NCBI-GeneID:

8602518

UniProt:

D1A995

Position

complement(1364878..1365828)

AA seq 316 aa
MLAATGDLPEDADRWCLELKWDGVRVVCHVTPHGVRAAGRRGADVTGRYPELSGLVDLVP
GREAVLDGEVVAFRHGRPSFERLQRRMHLDRPDPRLVRQVPVRYVVFDVLYLDGRPLYDL
PYLQRRQLLEELDLAGAGPFEAPPHLHAADTDQVKELVEYTWEQRLEGVVAKRVDSPYRP
GRRVDFWRKVKNFQTRDVIICGWKPGRGRREGGFGSLLLGAYDDGGALRFTGQVGTGFTD
RALEDIYERLWPLRCLTSPYDELLPRELARDAQWVEPVLVGEVAYGVWTREGHLRAPSWR
GLRDDKDPREVTYEPR

NT seq 951 nt +upstreamnt +downstreamnt
atgctggccgccaccggtgacctgccggaggacgccgaccgctggtgcctggagctgaag
tgggacggcgtgcgcgtcgtctgccacgtcaccccccacggcgtgcgggccgccggacgc
cgcggcgcggacgtcaccggccgctacccggagctgtccgggctggtggacctggtgccg
ggccgcgaggccgtcctcgacggcgaggtggtggccttccggcacggccggcccagcttc
gaacggctgcagcggcgcatgcacctcgatcgccccgacccccgcctggtccgccaggtg
cccgtccgctacgtggtgttcgacgtgctctacctggacggccgccccctctacgacctg
ccctacctgcagcggcggcagctgctggaggaactggacctggccggcgccggccccttc
gaggccccgccccacctgcacgccgccgacaccgaccaggtcaaggaactggtggagtac
acctgggagcagcgcctggagggcgtggtcgccaaacgggtggactccccctaccggccc
ggccggcgggtggacttctggcgcaaggtcaagaacttccagacccgcgatgtgatcatc
tgcggctggaagcccggccgcggccgccgcgagggcggcttcggctcactgctgctgggc
gcctacgacgacggcggggcgctgcgcttcaccgggcaggtcggcaccggcttcaccgac
cgggcgctggaggacatctacgagcggctgtggccgctgcgctgtctcaccagcccttat
gacgagctcctcccccgcgagctcgcccgcgacgcccagtgggttgaaccggtcctggtg
ggggaagtcgcctacggcgtgtggaccagggaggggcacctgcgcgccccgtcctggcgc
ggcctgcgcgacgacaaggacccccgggaggtcacctatgaaccccgctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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