KEGG   Thermomonospora curvata: Tcur_3935
Entry
Tcur_3935         CDS       T01127                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
tcu  Thermomonospora curvata
Pathway
tcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tcur_3935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcu03021]
    Tcur_3935
   03019 Messenger RNA biogenesis [BR:tcu03019]
    Tcur_3935
Transcription machinery [BR:tcu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     Tcur_3935
Messenger RNA biogenesis [BR:tcu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     Tcur_3935
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT Spore_III_AA AAA_25 AAA_22
Other DBs
NCBI-ProteinID: ACY99464
UniProt: D1AE38
Position
complement(4479100..4481139)
AA seq 679 aa
MSESSELLTDTSSPAAENTADRPERPTTRRRRSGTGLSALVLPELRTLAAQLGITGTTGM
RKSQLIAAIEAKQGGPVTGPSTAKSEPKSEAKAETESTSPSEPKTEPKSEPAESKASRDD
KAAQADKAEETASRSEEQADAGAAESRPARTRRTRSAKREEGEEQLAIPEEQQADKPADK
SADKAADKAADKDKQDDKAESADKSADKPADKTAEKTERGERARTAGEEGEGNGREGRQR
GRGGRERGEQQQNGQQRRGQNGAAEEENGESGRSRRGRRFRERNRGRGGRGERYEEPVIN
EDDVLIPVAGILDILDNYAFVRTTGYLPGPNDVYVSLSQVRKYGLRKGDVITGAVRQPRE
GERREKFNALVRLDTVNGMEPEQAKNRVEFSKLTPLYPQERLRLETDPNVLTTRIIDLVS
PIGKGQRGLIVSPPKAGKTMVLQAIANAITKNNPECHLMVVLVDERPEEVTDMQRSVKGE
VIHSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILS
GGVDSTALYPPKRFFGAARNIENGGSLTILATALVETGSRMDEVIFEEFKGTGNMELKLN
RQLADKRIFPAVDVEASGTRKEEILMSPEELRIVWQLRRVLHALDTQQALELLIEKMKET
KSNAEFLLQVQKTTVADRD
NT seq 2040 nt   +upstreamnt  +downstreamnt
gtgagcgaatccagcgaactccttacggacacctccagccccgcagctgagaacaccgcg
gaccggccggagcgccccacgacgcggcgccggcgttccggcaccggcctgtcggcgttg
gtgctgcccgaactcaggacgctggccgcccagctcggcatcaccggcaccaccgggatg
cgcaagagccagctcatcgccgccatcgaggccaagcagggcggacccgtcaccgggccg
agcaccgccaagtccgagcccaagtccgaggccaaggccgagaccgagtccacgtcgccg
agcgagcccaagaccgagcccaagagcgagccggccgagtccaaggcgagccgggacgac
aaggcggcccaggcggacaaggcggaggagaccgcctcccgctccgaggagcaggccgac
gcgggcgcggccgagagccgtccggcgcgcacccgccgcacccgttccgccaagcgcgag
gagggcgaggaacagctcgccatccccgaggaacagcaggccgacaagcccgccgacaag
tccgccgacaaggcggccgacaaggcggccgacaaggacaagcaggacgacaaggcggag
tccgccgacaagagcgccgacaagcccgctgacaagaccgcggagaagaccgagcgtggg
gagcgcgcccggaccgccggcgaggagggcgagggcaacgggcgcgagggccgtcagcgc
ggccggggcggccgggagcgcggcgagcagcagcagaacggccagcagcgccgcggccag
aacggcgccgccgaggaggagaacggcgaaagcggccgcagccgccggggccgccgcttc
cgggagcgcaaccgcggccgcggcggccggggcgagcggtacgaggagccggtgatcaac
gaggacgacgtgctgatcccggtggccggcatcctcgacatcctggacaactacgcgttc
gtccgcaccaccggctacctgcccggccccaacgacgtctacgtctcgctgtcccaggtc
cgcaagtacgggctgcgcaagggcgatgtgatcaccggtgcggtgcgccagccgcgcgag
ggcgagcggcgggagaagttcaacgcgctggtccgcttggacaccgtcaacggcatggag
cccgagcaggccaagaaccgcgtggagttctccaagctcaccccgctgtacccgcaggag
cggctgcggctggagaccgacccgaacgtgctgaccacgcggatcatcgacctggtctcc
ccgatcggcaagggccagcgcggcctgatcgtctccccgcccaaggcgggcaagacgatg
gtgctgcaggcgatcgccaacgcgatcaccaagaacaaccccgagtgccacctgatggtg
gtgctggtggacgagcggcccgaagaggtcaccgacatgcagcggtcggtcaagggcgag
gtcatccactcgaccttcgaccgtccggccgaggaccacaccaccgtcgccgagctggcc
atcgagcgggccaagcggctggtggagctgggccacgacgtggtggtgctgctggactcc
atcacccggctgggccgcgcctacaacctggccgcccccgcttccgggcgcatcctgtcc
ggtggtgtggactccaccgcgctgtacccgcccaagcggttcttcggcgccgcccgcaac
atcgagaacggcggttccctgaccatcctcgccaccgcgctggtggagaccgggtcccgc
atggacgaggtcatcttcgaggagttcaagggcaccggcaacatggagctcaagctcaac
cggcagctcgccgacaagcggatcttccccgcggtggacgtggaggcctccggcacccgc
aaggaggagatcctcatgtcccccgaggagctgcgcatcgtctggcagctgcgccgggtg
ctgcacgccctggacactcagcaggccctggagctcctcatcgagaagatgaaggagacc
aagtccaacgccgagttcctgctccaggtgcagaagaccacggtcgccgaccgggactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (88)   
   KEGG ORTHOLOGY (1)   
   RefGene (85)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (101)   

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