KEGG   Hydrogenovibrio crunogenus: Tcr_0998
Entry
Tcr_0998          CDS       T00296                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tcx  Hydrogenovibrio crunogenus
Pathway
tcx02024  Quorum sensing
tcx03060  Protein export
tcx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tcx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Tcr_0998
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Tcr_0998
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Tcr_0998
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tcx02044]
    Tcr_0998
Enzymes [BR:tcx01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Tcr_0998
Secretion system [BR:tcx02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Tcr_0998
  Eukaryotic Sec-SRP protein
   Tcr_0998
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA cobW AAA_16 Helicase_RecD YqeC AAA_31 KTI12 Thymidylate_kin ABC_tran AAA_19 AAA_14 AAA_33 DnaB_C ATP_bind_1 APS_kinase nSTAND3 ArsA_ATPase AAA_30 DO-GTPase1 AAA_18 NACHT ATPase_2
Other DBs
NCBI-ProteinID: ABB41593
UniProt: Q31GY0
Position
1074589..1075968
AA seq 459 aa
MFDNLSDRLAKSFKTITGQGRLTESNIKDALRDVRRALLEADVALPVVKSFIDKVQERAI
GQEVSTSLNPGQAFIKIVREQLTEIMGQEAEPLNFNVEPPAIIMVAGLQGAGKTTSVGKL
ARWLKEREKKKVMVVSADVYRPAAIKQLETLAEQVDVSFYPSTADEDPVDIAKKAHAEAK
KQFVDVLILDTAGRLHVDEDMMQEVQRLHTAIKPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKTDGDARGGAALSIREITGKPIKFIGAGEKTEALESFHPDRMAGRILGMGDV
LSLIEDAESKIDQKKAQKFAKKMQKSGQFDLEDFLEQLQQINSMGGVGGLMGKMPGMNQM
KGQINNEAVEKDFKRLEAIIYSMTRQERAHPAIIKGSRKKRIANGSGTSVQDINKLMKQF
TQMQKMMKKVSKGGMKNMMRGMAGKMPPGMGGMLPPGMR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtttgataatttatcggatcgtttagccaaatcgtttaaaacgattaccgggcaagga
cgcttaacagaatctaatattaaagatgcgctgcgagatgttcgacgcgcattactggaa
gccgatgtggctttgccggttgttaaatcctttattgacaaggttcaggaaagagccatc
ggtcaagaagtttccaccagtttaaatccgggccaggcctttattaaaattgtgcgcgag
cagctgacggagatcatggggcaagaagccgagcctttgaacttcaatgttgaaccgccg
gccattattatggttgccgggttgcaaggggcgggtaaaaccacctcggtcggtaaactg
gcgcgttggttaaaagaacgcgaaaagaaaaaagtcatggtggtttcggccgacgtttat
cgcccagcggcgatcaagcagttggaaacactggccgaacaagttgacgtgagtttttac
ccttcaacggcggatgaagatccggttgatattgctaaaaaggcccatgcggaagcgaag
aaacagtttgttgatgtattgattctggatacggcagggcgtttgcacgtcgatgaagac
atgatgcaagaagtgcagcgcttgcacaccgcaatcaaaccggttgaaacgttgtttgtg
gtcgatgctatgaccgggcaagatgccgctaatacggccaaagcctttaatgatgcgttg
ccgttaaccggggtcattttaaccaaaaccgacggggatgctcgtggcggtgcggcgtta
tccattcgtgaaattaccggtaagccgattaagtttatcggggcgggtgaaaaaaccgag
gctttagaatcgttccacccggatcgtatggcgggtcgcattttaggaatgggcgatgtc
ctgagtttgattgaagacgcggaaagcaaaatcgatcaaaagaaagcgcagaaattcgcc
aagaaaatgcaaaaatccggtcagtttgacttggaagatttccttgagcagcttcagcaa
atcaacagcatgggcggtgttggcggtttgatgggcaaaatgccgggcatgaatcaaatg
aaaggtcaaatcaataacgaggccgttgaaaaagattttaaacgcctggaggcgattatc
tattccatgacgcgtcaggaaagagcgcatccggccatcatcaaagggtcccgtaaaaag
cgtattgccaatgggtcgggcacctcggtgcaagacatcaataagctgatgaagcagttt
actcaaatgcagaagatgatgaagaaagtctcgaaaggcggcatgaaaaacatgatgcgt
ggtatggcagggaaaatgccacctggaatgggcggcatgttaccacctggcatgcgttaa

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