KEGG T00296: Tcr

Thiomicrospira crunogena: Tcr_1101

Entry

Tcr_1101 CDS T00296

Definition

isocitrate dehydrogenase (EC:1.1.1.42)

Orthology

K00031

isocitrate dehydrogenase [EC:1.1.1.42]

Organism

tcx Thiomicrospira crunogena

Pathway

tcx00020	Citrate cycle (TCA cycle)
tcx00480	Glutathione metabolism
tcx01100	Metabolic pathways
tcx01110	Biosynthesis of secondary metabolites
tcx01120	Microbial metabolism in diverse environments
tcx01210	2-Oxocarboxylic acid metabolism
tcx01230	Biosynthesis of amino acids

Module

tcx_M00010

Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:tcx00020]
Metabolism; Metabolism of other amino acids; Glutathione metabolism [PATH:tcx00480]

SSDB

Motif

Pfam:

IDH

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1183165..1185384

AA seq 739 aa
MTAKIIYTLTDEAPALATYSLLPIVEAFTKAAGVSVETRDISLAGRILANVPDKLSEAQK
VGDALTELGNLAKTPEANIIKLPNISASVPQLNAAIKELQSQGYDIPDYPATPQNAEEEK
IKAAYAKVLGSAVNPVLREGNSDRRAPTSVKNFAKKHPHSMGAWSEDSKSKVAHMTEGDF
YGSEKSMTLPEATEFKIEFVSESGDIKELKGTAPLQAGEVIDAAVMSQKALRDFLAKAVA
EAKEQGILFSIHLKATMMKVSDPIIFGQAVSVFFEDVFKKYADEFKKLGVNPNNGLGDVY
SKIESLPADKQAEIEASIAKTIEDKADVAMVDSDKGITNLHVPSDVIVDASMPAMIRTSG
KMWNKDGQQQDALAVIPDRCYAGVYQETINFCKHHGAFDPTTMGTVPNVGLMAQKAEEYG
SHDKTFQMDNAGTVRVVEPNGNVLLEQTVEAGDIFRMCQVKDAPIQDWVKLAVNRARATN
TPAVFWLDTNRAHDHQLIEKVNHYLLDHDTTGLEIHIMSPEEATRFTLRHVKEGKDVISV
TGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQFMSENHLRW
DSLGEFLALAVSLEHLATHFNNPKAQVLADTLDKATGRFLENNKSPSRKVGEIDNRGSHF
YLAMYWAQELAAQKADAELKARFEKVADALTQNEDTIMSELNGSQGKSVDIGGYYKFNGE
LASQAMRPSATLNTLIDAV

NT seq 2220 nt +upstreamnt +downstreamnt
atgaccgcaaagattatttatacattaacggatgaagcacctgcactagcaacttattct
cttttaccgattgtcgaagcctttaccaaggccgcgggcgtgtcggttgaaacacgggat
atttcgttagcaggtcgtattcttgcaaacgttcctgacaagttgagtgaggcacaaaaa
gtaggggatgctttaaccgagttgggtaatttagcgaaaacgcctgaagcaaacattatt
aagctgccgaatatcagtgcttccgtaccgcaattgaatgccgctattaaagaattgcaa
agccagggatatgacattcccgattatccggcaacaccacaaaatgccgaagaagaaaaa
atcaaagcggcttatgccaaagtgcttggaagtgcggtcaatccggttttgcgcgaaggg
aattccgaccgtcgagcgccgacttcggtgaaaaactttgccaaaaaacacccgcattca
atgggcgcttggtctgaagattcaaaatcgaaagtggcacacatgaccgaaggcgacttt
tacggttcagaaaaatcgatgacgttaccggaagcgacggaatttaaaattgaattcgtt
tctgaatcaggtgacattaaagagttgaaaggcaccgcgcctttgcaagcgggtgaagtg
attgatgcggctgtcatgagtcagaaagcgttaagagacttcctggccaaagccgttgcg
gaagcaaaagaacaaggtattttgttctcgattcatttgaaagcgaccatgatgaaggtg
tctgacccgattattttcggtcaagccgtttcggttttctttgaagacgtctttaaaaaa
tacgctgatgagtttaaaaaactgggtgtgaatccgaataatggcttgggagacgtttat
tccaaaatcgaatcgttgccagcggataaacaagccgaaattgaagcctccattgctaaa
accattgaagacaaagcggatgtcgcgatggtcgattcggataaaggcatcactaattta
catgtaccatccgatgtgattgttgatgcgtcaatgccagcgatgattcgtacctcaggg
aaaatgtggaataaagacggtcaacaacaagatgctttggcggtgattccagaccgttgt
tatgcaggcgtttaccaagaaaccattaatttctgtaagcatcacggcgcgtttgaccca
accacaatgggaaccgtgcctaatgtgggcttgatggctcagaaagccgaagaatacggt
tcacatgataaaaccttccaaatggacaatgccggtacggttcgagtggttgaaccgaat
ggcaacgtactgctggaacaaacggttgaagcaggcgatattttccgtatgtgtcaggta
aaagatgcgccgattcaagactgggttaaactggccgtgaatcgtgcgcgtgccactaat
acaccggcggttttctggctggatactaatcgcgcacatgaccatcagttgattgaaaaa
gtgaaccactacttattggatcacgacacaacgggattggaaattcacattatgtcgcca
gaggaagccacgcgctttactttgcgtcatgtaaaagaaggcaaggatgtcatttcggtt
acggggaacgtgttgcgtgattacctaacggacttattcccgattttagaattaggaaca
tctgcaaaaatgctgtcaatcgtgccgttgatgaatggtggtggcttgtttgaaaccggc
gcgggtgggtcagcaccaaagcacgttcaacaattcatgagcgaaaaccatttacgttgg
gactctttgggtgaattcctggctttagctgtatcgcttgaacatttggcaacccatttc
aacaacccgaaagcacaagtgttggccgataccttagataaagccacggggcgtttcctg
gaaaacaataaatcgccatctcgtaaagtgggggaaattgataaccgtggcagtcatttc
tatttagcgatgtactgggcacaggaattggcggcacaaaaagccgatgcggagctgaaa
gcccgttttgaaaaagtggcggatgcgttaacgcaaaatgaagacacgattatgtcggaa
ttaaatggctcgcaaggcaagtcagttgatatcggtggctactacaaattcaatggtgag
ttggcgagccaagccatgcgtccaagcgctacgttaaacacgttgattgatgctgtttaa

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-TCX (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (28)   

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