KEGG   Thiomicrospira crunogena: Tcr_1921Help
Entry
Tcr_1921          CDS       T00296                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tcx  Thiomicrospira crunogena
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tcx00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Tcr_1921
Enzymes [BR:tcx01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Tcr_1921
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tcr_1921
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2104331..2105173
Genome map
AA seq 280 aa AA seqDB search
MPELPEVETTRKGIQPKVEGQAIQKIIIRNGKLRWPVDPSLVEKLPGLVVLSIKRRAKYL
LLETDQGHLIIHLGMSGNLRVLPQHEPAVKHDHIDLLLENGFLLRYHDPRRFGSWLWTEA
PIQEHSLLKSLGPEPLTDAFNAEYLFQKLQGRKTAIKTFIMNNQIVVGVGNIYANESLFL
SGIHPTRPAQSLTLTEATKLTAHIKTVLSAAIEQGGTTLKDFLTPDGKPGYFEQKLNVYG
RENLPCPQCDSAIEKVVLNQRAAYFCSNCQKQLDSTVKIK
NT seq 843 nt NT seq  +upstreamnt  +downstreamnt
atgccagaattacccgaagtagaaaccacccgaaaaggcattcagcccaaagttgaaggt
caagccattcaaaaaatcatcattcgcaatggtaagcttcgttggccggtggatccaagt
ctggttgaaaaactcccaggcctggtggtgttaagcattaagcgccgtgccaaatatctg
cttctggaaacagatcaagggcatttaatcattcatttaggcatgtccggtaacttgcgt
gtactcccgcaacatgagcccgccgtcaaacatgatcacatcgatctgttgctggaaaat
ggtttcttattacgctaccacgacccccggcgttttggaagctggctatggactgaggcg
ccaatacaagaacactcgttactgaaatcgcttggcccagaaccattaaccgatgcgttt
aatgcagaatacctttttcaaaaactgcagggtcgaaagacagcgatcaagacgtttatt
atgaacaatcaaatcgtggtaggagttggaaacatttatgccaatgaatcgctttttcta
agcggcattcacccaaccagacccgcacagagtttaacgctcaccgaagcgaccaaactc
accgcgcacatcaaaacggttttaagtgctgccatcgaacaaggaggaactaccctaaaa
gactttttaacccccgatggcaagccaggttatttcgaacagaaattgaatgtttatggc
cgagaaaatttaccctgcccacaatgtgattctgcaattgaaaaagttgttctaaatcaa
cgagccgcttacttttgttcaaattgtcaaaagcagcttgattcaactgttaagataaaa
tga

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