KEGG   Thiomicrospira cyclica: Thicy_0291Help
Entry
Thicy_0291        CDS       T01517                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tcy  Thiomicrospira cyclica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tcy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Thicy_0291
Enzymes [BR:tcy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Thicy_0291
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Thicy_0291
DNA repair and recombination proteins [BR:tcy03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Thicy_0291
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(380035..380865)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETTLRGIAPSLTGQTVAALQVHQGRLRWPVPTELTEKLALQPLLHLRRRAKYL
LLDFPTGTLIIHLGMSGSLRILPVDTPRKKHDHIDLITTQGQTLRYHDPRRFGAWLWTED
TAENHPLLNHLGPEPLDDAFDANWLLQQAKNRKIPLKTLIMDNKVVVGVGNIYANESLFL
AGLHPNMAAKDLNSTQAERWVMIIKQVLAKAIEQGGTTLRDFYNADGQAGYFKQHLYVYG
RTGLACQVCGTRLEKMIIQQRASVFCPQCQPLITKR
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgaattacccgaggttgaaaccaccctacggggtattgcacccagcttgaccggt
caaaccgttgccgcccttcaggttcaccaagggcgcttgcgttggccagtacccactgaa
ttgaccgaaaaattagccctgcaaccattgttgcatttacgtcgccgtgccaaatacctg
ctgttggattttccgaccggcacgctaattattcatctgggcatgtcgggctcgctgcgg
attttgccggtcgatacgccgcgcaaaaagcatgaccatattgatttaatcaccacccag
ggacaaaccctgcgctaccacgaccctcggcggtttggcgcttggttatggaccgaagac
acggcggaaaaccacccactgcttaaccacctcggccccgaacccttagacgatgctttt
gatgcgaactggctattgcaacaggccaaaaaccgcaaaataccgctaaaaacactgatt
atggataataaggtggtggttggcgtgggtaatatttatgccaatgaatcgttattttta
gcaggcctgcacccgaatatggccgccaaagatttaaactcgacgcaagccgaacgctgg
gtgatgattattaaacaggtattggcgaaggccattgaacaaggcggcaccaccctgcgc
gacttttacaatgccgatggacaagccgggtattttaaacagcatctctatgtttatggt
cgcactggtctggcctgccaagtttgtggcacgcggctagaaaaaatgattattcaacaa
cgcgccagtgtgttctgcccacaatgccaacccctcattaccaaacgctaa

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