KEGG   Tenacibaculum dicentrarchi: AUW17_11185
Entry
AUW17_11185       CDS       T04208                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
tdi  Tenacibaculum dicentrarchi
Pathway
tdi03030  DNA replication
tdi03430  Mismatch repair
tdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AUW17_11185
   03430 Mismatch repair
    AUW17_11185
   03440 Homologous recombination
    AUW17_11185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tdi03032]
    AUW17_11185
   03400 DNA repair and recombination proteins [BR:tdi03400]
    AUW17_11185
Enzymes [BR:tdi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AUW17_11185
DNA replication proteins [BR:tdi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AUW17_11185
DNA repair and recombination proteins [BR:tdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AUW17_11185
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 RNase_T tRNA_anti-codon Isochorismatase HHH_3 Pox_A3L Intimin_C
Other DBs
NCBI-ProteinID: ALU75777
Position
2592543..2596916
AA seq 1457 aa
MYLIFDTETTGLPKNWNAPFTDTDNWPRATQIAWQLHDELGNLIEHHDFLIKPEGFNIPY
DAERIHGISTDLAQEQGIELPEGLALFNEALSKTKFVVGQNVGFDLNIMGCEFHRLGVDT
ILNDLPILDTCTEQTAKMCQIPGGRGGKFKLPTLTELHKHLFGFGFGDAHNATADVEATT
RCFLELVRLRQFTKEQLDVSDDFFDNFNKTNPTPIQVIGLNHLNLKKESEKIRARIEKAK
GVTKTISTNEGLAKLENASFAHLHNHTQYSVLQSTIQIGNLVKAAAKDNMSAVAMTDTGN
MMAAFHFVQAVLNHNKSVEKANIEAIEKGETPTQKPLKPIVGCEFNICTDHTNKSQKDNG
YQVVLLAKNKKGYHNLAKMSSIAFVDGFYYIPRIDRKVVEQYKEDIIVLTGSIYGEVPSK
ILNVGEAQAEEALLWWKAQFGDDLYIELMRHNQDDERVVNETLLKFSKKHNVKTVASNNT
FYLDKKDANAHDILLCVKDGEKQATPKGRGRGYRYGLPNDEYYFKSSEEMKKLFADLPEA
IINIQEIVDKITPYTLARDVLLPAFDIPNEFKDEKDNEDKGKRGENNFLRHLTYVGAKKR
YGEITESIRERLDFELEVIEKTGYPGYFLIVEDFIREARNMDVAVGPGRGSAAGSVVAFC
LWITNIDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITY
GTMAAKSSIRDTARVLDLPLFEADRIAKLIPGMKLKKIFSLDDKQLSEKLRTEEIELVNE
LKRLSNGSDLMAETINKARILEGSVRNTGIHACGVIITPDDITKFVPVALAKDSDMYVTQ
FDNSVVEDAGLLKMDFLGLKTLTLIKDTVKIVKARHDVLLDPETFPLDDVKTYELFQRGE
TVGIFQYESPGMQKHMRSLKPTVFEDLIAMNALYRPGPMEYIPSFIRRKHGDEEIEYDLP
AMEEYLSETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFVKQA
IANGHDEKKLEKIWTDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNM
NDIKSVSFFMEECKRAGITVLGPDVNESFSKFSVNKEGAIRFGMAAIKGVGALAVKAIIT
EREKNGGFNSVFDVAKRVDLRVANKKAFEGLILAGGFDSFKNTHRAQYFIEDEKNQKFIE
KVLRFGNKYQENLNSAQVSLFGGASEEEMPEPIIPICDTWGTMELLGKEKEVVGIYISAH
PLDDFKNELKFCNAKLSYYNDLPKYEGMALTFGGIVTDVQHRISKAGKGWATFFIEDYSE
NFEFRIFGEEYLKFKHFLVPNSFLFVKTMVKPGWTNREGIKGDPRVGFTEFILLHDIMDK
MCKKITIKMHLKEVNENRIKNLQHLFTTNKGSQNLHFTIWDTEEKIELNMPSRNTKVKIT
NEFLSSLENQHIKYKLN
NT seq 4374 nt   +upstreamnt  +downstreamnt
atgtatttaatttttgatactgaaactaccggattaccaaaaaactggaacgcacctttt
acagatactgataattggccaagagcaacccaaattgcatggcaattgcatgatgaatta
ggaaacttaattgaacatcatgatttccttattaaacctgaaggatttaatattccttat
gatgctgaaagaatacacggtatttctactgatttagctcaagaacaaggaattgaactt
cctgagggtttggctttattcaacgaagcattaagtaaaaccaaatttgtggtaggtcaa
aatgtaggttttgatttaaatattatgggttgtgaatttcatcgtttaggtgtcgatacc
attttaaacgacctccctattttagatacttgtacagagcaaaccgctaaaatgtgtcaa
attcctggtggtcgtggcggtaaatttaaattacctacgctaacagaattacacaaacat
ttatttggttttggttttggtgatgctcacaacgcaactgccgatgtagaagcaacaaca
cgttgttttttagaattggttcgtttgcgtcaatttaccaaagaacaattagatgtttct
gatgatttctttgataatttcaacaagaccaaccctactcctattcaagtaatcggatta
aatcacttaaacttaaagaaagaaagtgaaaaaattcgtgcaagaattgaaaaagcaaaa
ggtgttacaaaaaccatcagtactaatgaaggtttagcaaaattagaaaatgccagcttt
gcacacttacacaatcatacacaatattctgttttacaatcgaccattcaaataggaaat
cttgtaaaagcagctgctaaagataatatgtcggcagtagcaatgaccgatactggtaat
atgatggcggcttttcattttgtacaagcggttttaaatcataataaatccgtagaaaaa
gcaaatattgaagccattgaaaaaggagaaacaccaacgcaaaaaccgttgaaacctatt
gttggttgtgaatttaatatttgtaccgaccacactaataaaagccaaaaagacaacggt
tatcaagttgttttattagcaaaaaataaaaaaggatatcacaatttagcaaaaatgtca
tctatcgcttttgtcgatggattttattatatcccaagaatcgacagaaaagtagttgaa
caatataaagaagacatcattgtgcttacaggtagtatctatggtgaagttcctagtaaa
atattaaatgttggtgaagcacaagccgaagaagcacttctttggtggaaagcacaattt
ggtgatgatttatacatcgaattaatgcgtcataatcaagacgatgaaagagttgttaac
gaaacacttttaaaattttcaaaaaaacacaatgtaaaaacagttgcctctaacaatact
ttttatttagataaaaaagatgccaatgctcatgatattttattgtgtgtaaaagatggt
gaaaaacaagctactccaaaaggacgaggacgaggttatcgctacggtttaccaaacgat
gaatattacttcaaatcatccgaagaaatgaaaaaattgtttgctgaccttcctgaagca
attataaatattcaagaaattgttgataaaataacaccctacaccctagctcgtgatgtt
ttattacctgcctttgatattcctaatgaatttaaagatgaaaaagataatgaagacaaa
ggaaaacgtggtgaaaataattttttacgtcatttaacctatgtaggtgcaaaaaaacga
tacggagaaattacagaaagtattcgtgaacgtttagattttgaattggaagtaattgaa
aaaacagggtatccaggatactttttaattgttgaagattttattcgagaagcaagaaat
atggatgttgctgtaggtcctgggcgtggttctgcggcaggttcggtagttgctttttgc
ttgtggattacaaatattgatccgattaaatacgatttactttttgagcgtttcttaaat
cctgaacgtgtatcaatgcccgatattgatattgattttgatgatgaaggacgtggacgt
gtaatggattatgtaattgataaatatggtgcaaatcaggtagcgcaaattataacctac
ggaactatggcggcaaaatcttctattagagataccgctcgtgttttagatttaccgctt
tttgaagccgatagaattgccaagttaattcctggaatgaagctgaagaaaatattttct
ttagatgataaacaactaagtgaaaaacttagaaccgaagaaattgaattggtaaacgaa
cttaaaaggctttctaacggttcggatttaatggcggaaaccattaataaagctcggatt
ttagaaggttctgttcgaaatacaggaatccatgcctgtggtgttattattacacctgac
gatattacaaaattcgtacctgttgccttggcaaaagattctgacatgtacgtaactcag
tttgataactcggttgtagaagatgctggtttattaaaaatggatttcttgggattaaaa
acgctaaccttaattaaggataccgttaaaattgtaaaagcacgtcacgatgtactttta
gaccccgaaacttttcctttagatgatgtaaaaacctacgaacttttccaaagaggagaa
actgttggtatttttcaatatgaatctccaggaatgcaaaaacatatgcgctcattaaag
cctactgtttttgaagatttaattgccatgaatgccttgtatcgtcctggaccgatggaa
tatattccttcttttatccgaagaaaacacggagatgaagaaattgagtacgatttacca
gcaatggaagaatacttatctgaaacctatggaattacggtttatcaagagcaagtaatg
ttattatcgcaaaaattagccgattttacaaaaggtgaagccgatgttttacgtaaagca
atgggtaaaaaacaaattgcagtactagataaaatgaaacctaagtttgtaaaacaagca
attgcaaacggacatgatgaaaagaaactagaaaaaatctggacagattgggaagccttt
gcatcctatgcatttaacaaatcacactctacttgttatgcttggattgcctatcaaaca
gcttatttaaaagcacattatcctgccgaatatatggcagcggtattgtcaaataatatg
aatgatattaaatccgtttcattttttatggaagaatgtaaacgtgcaggaattacagtt
ttaggtcctgatgttaatgaatcattttctaaattttcagtaaataaagaaggtgctatt
cgtttcggaatggcagctattaaaggggttggtgcacttgctgtaaaagcgattattacc
gaacgtgaaaaaaatggagggtttaactctgtttttgatgttgccaaacgtgttgattta
cgtgtagcaaataaaaaagcttttgaaggtttaattttagcaggtggattcgactctttt
aaaaatacacacagagctcaatattttatcgaagatgaaaaaaaccaaaaatttatagaa
aaagtattgcgttttggaaataaatatcaagaaaatttaaattcagcacaagtttcatta
tttggtggtgcatccgaagaagaaatgcccgaaccaattatacctatttgcgatacttgg
ggaactatggagttgctaggaaaagaaaaagaagttgttggtatttatatttctgcacat
ccgctagatgattttaaaaatgaattaaaattttgtaacgcaaagctttcttattataat
gacctgcctaaatatgaaggtatggcattaacttttggaggaattgttaccgatgtacaa
catcgaatttcgaaagcaggaaaaggatgggcaacattttttattgaagattatagtgaa
aattttgagttcagaatttttggtgaagaatatttaaaattcaaacattttttagttcct
aattcatttttatttgtaaaaactatggtaaaacctggttggacaaatagagaaggtata
aaaggagacccaagagttgggtttacagagtttatattacttcatgatattatggataaa
atgtgtaaaaaaataactataaaaatgcatttaaaagaagtaaatgaaaaccgaataaaa
aacttacaacatttatttacaactaataaaggttctcaaaatttacattttaccatttgg
gatactgaagaaaaaatagaattaaatatgcctagtagaaatactaaagtaaaaataact
aatgaatttttaagttctttagaaaatcaacatattaaatataaattgaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (84)   
   KEGG ORTHOLOGY (1)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (103)   

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