KEGG T00298: Suden

Sulfurimonas denitrificans: Suden_0584

Entry

Suden_0584 CDS T00298

Definition

DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tdn Sulfurimonas denitrificans

Pathway

tdn03410	Base excision repair
tdn03420	Nucleotide excision repair
tdn03430	Mismatch repair

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tdn03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tdn03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tdn03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining

SSDB

Motif

Pfam:

DNA_ligase_OB_2 DNA_ligase_A_M

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

592181..592999

AA seq 272 aa
MKNLFKLIIFTLLFVTSSSALTLQKGTLYTNQDIKGYLMSEKLDGIRAYWDGKNLLTRQN
KVINAPEFFTQNLPPFELDGELWTSRGDFENIQSIVMDKTPSKKWSEIKYMIFEVPHAKG
DFLKRLEKAREHIEKKRALHVEIIEQKICNSKRDLDLFLKEILSRGGEGVMLKDASREYF
EGRSEHLLKVKKADDMEAEVIGIKEGKGKFKGLMGSLHVRVESGVEFFIGSGFSDEDRKN
PPKIGEIVTFKYYGFTKEGKPKFASFMRVRED

NT seq 819 nt +upstreamnt +downstreamnt
atgaaaaacctgtttaaattaataatctttactctattgtttgtaacttcatcaagtgct
ctgactcttcaaaagggcactctctatacaaatcaagatattaaagggtatctaatgtct
gaaaaacttgacggtataagagcttattgggatggtaaaaatcttctcacaagacaaaat
aaagtcataaacgctcctgagttttttacgcaaaatcttccgccatttgagcttgatggt
gagctttggacttcaagaggagattttgaaaatatacagtcaatagttatggacaaaact
ccttcaaaaaagtggagcgagataaaatatatgatttttgaagtccctcatgcaaagggt
gattttttaaagcgtttggaaaaagcaagagagcatatagaaaaaaagagagctctacat
gtagagattatagagcaaaaaatctgtaactcaaagagagatttggatctatttttaaaa
gagattctctcaaggggcggagagggagtcatgttaaaagatgcttcaagagagtacttt
gagggtagaagtgagcatctgttaaaggttaaaaaagctgatgatatggaagcagaggtg
attggcattaaagaaggaaagggtaagtttaaagggctgatgggaagcttacatgtaaga
gtagagagtggggttgaattttttatagggagcggttttagcgatgaagatagaaaaaat
ccgccaaaaataggtgaaatagtcacttttaaatattatggttttacgaaagagggcaaa
ccaaagtttgcatcatttatgagagtaagagaggattga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-TDN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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