KEGG T.denitrificans_ATCC33889: Suden

Sulfurimonas denitrificans: Suden_1947

Entry

Suden_1947 CDS T.denitrificans_ATCC33889

Definition serine hydroxymethyltransferase (EC:2.1.2.1)

Orthology K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]

Pathway tdn00260 Glycine, serine and threonine metabolism
tdn00460 Cyanoamino acid metabolism
tdn00670 One carbon pool by folate
tdn00680 Methane metabolism
tdn01100 Metabolic pathways

Class Metabolism; Energy Metabolism; Methane metabolism [PATH:tdn00680]
Metabolism; Amino Acid Metabolism; Glycine, serine and threonine
metabolism [PATH:tdn00260]
Metabolism; Metabolism of Other Amino Acids; Cyanoamino acid
metabolism [PATH:tdn00460]
Metabolism; Metabolism of Cofactors and Vitamins; One carbon pool by
folate [PATH:tdn00670]

SSDB

Motif Pfam: SHMT DegT_DnrJ_EryC1 Beta_elim_lyase
PROSITE: SHMT

Other DBs NCBI-GI: 78778141
NCBI-GeneID: 3762951
JGI: Tmden1947
UniProt: Q30P60

Position complement(2030982..2032244)

AA seq 420 aa
MSFISSKSLEHADREVFSIIEGELKRQTAHLEMIASENFTSPAVMEAMGSVFTNKYAEGY
PYKRYYGGCEYADAVEQLAIDRACEIFGCKFANVQPHSGSQANAAVYAALLKAGDKLLGM
DLSHGGHLTHGSKPSFSGQNYSSFTYGVEADGRMDYDKILEIAKAVQPKIIVCGASAYAR
EIDFKKFREIADAVGAFLFADIAHVAGLVAADEHMSPFPHAHVVTTTTHKTLRGPRGGMI
MTDDEEIAKKINSAIFPGIQGGPLVHVIAAKAVAFKEILDPSWREYAKQVKANAKVLEVV
LTKRGYDLVSGGTDNHLVLVSFLNRDFSGKDADAALERAGITVNKNGVPNDTRSPFITSG
IRIGSPALTARGMKEAEFELIANKICDVLDNINDTELHVKINKELEELAKGFVIYNKSTF

NT seq 1263 nt +upstreamnt +downstreamnt
atgagttttatatcaagcaaaagtttagaacatgcggacagggaagtattttcaatcata
gaaggcgagttaaagaggcaaactgctcacttagagatgattgccagtgaaaactttaca
agtccggcggttatggaagctatgggaagcgtatttacaaacaagtacgctgagggttat
ccatacaagagatattatggcggttgcgaatatgctgatgctgttgagcagttagctatt
gatagagcttgtgagatatttggctgtaaatttgcaaatgttcaaccacactcaggaagt
caagcaaatgcagctgtttatgcggcacttctaaaggctggtgacaaactcttaggtatg
gatttaagtcatggcggacacttgacacatggtagcaaaccgagcttttcagggcaaaac
tactcaagttttacttatggtgttgaggcagacggaagaatggactatgataaaatctta
gaaatcgcaaaagcagttcaaccaaagattatcgtttgtggagcatcggcttatgctaga
gagatagactttaaaaaattccgtgaaattgctgatgctgttggagcttttctttttgca
gatatcgctcatgtggctggtttagtcgcggcagatgagcatatgagtccatttcctcac
gctcatgtagtaacaacaactactcataagactctaagaggtccaagaggcggtatgatt
atgacagatgatgaagagatagcaaagaagataaactctgctattttcccaggtattcaa
ggtggtccgcttgtacatgttatcgctgcaaaagctgttgcatttaaagagatactagac
ccgtcatggagagagtatgcaaaacaagtaaaggcaaatgcaaaagtgcttgaagttgtt
ttaacaaaaagaggttatgatttggtctctggcggaacggacaaccacttagtgttggtg
tcgtttttaaacagagatttctcaggtaaagatgcagatgcagcgctggagagagcggga
atcacagtaaacaaaaacggtgttccaaacgacacaagaagcccttttataacaagcggt
atccgtataggaagcccagcactaacggctagaggtatgaaagaagcagagtttgaactt
atcgcaaacaaaatctgcgatgttttggataatataaacgatacagagctacatgtaaag
ataaacaaagagttagaagagttagcaaagggctttgtgatttataataaatcaactttt
taa

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   JGI-TDN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (3)   
   PROSITE (1)   
All databases (20)

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