KEGG   Candidatus Tenderia electrophaga: Tel_09665
Entry
Tel_09665         CDS       T04171                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
tee  Candidatus Tenderia electrophaga
Pathway
tee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Tel_09665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tee03019]
    Tel_09665
   03009 Ribosome biogenesis [BR:tee03009]
    Tel_09665
Enzymes [BR:tee01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     Tel_09665
Messenger RNA biogenesis [BR:tee03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Tel_09665
Ribosome biogenesis [BR:tee03009]
 Prokaryotic type
  rRNA processing factors
   Tel_09665
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1 DnaJ_CXXCXGXG
Other DBs
NCBI-ProteinID: ALP53396
UniProt: A0A0S2TE64
Position
2106900..2109380
AA seq 826 aa
MLINATQKEELRVALVDGQRLYDLDIELPGREQKKANIYKGKITRIEPSLEAAFVDFGSE
RHGFLPLKEIAPDSYAKQPQDENRRPNIKEILKEGQEVVVQVDKEERGNKGAALTTFVSL
AGRYLVLMPNNPRAGGVSRRIEGEDRSELREAMAAMEIPEGMGVIVRTAGVGKSTEELQW
DLDYLVRLWQAIEKAGQERAAPFLVYQESNLIIRAIRDYFRQDIGEILIDAKEVYDYAQD
FMTQVMPHNKKKVKFYDDSVPLFSRYQVESQIETAFQHEVRLPSGGAIVIDRTEALVSID
INSSRATQGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPSRNQREVENRL
REALKMDRARVQVGRISRFGLLEMSRQRLRPSLEESIQTTCPRCKGEGSIRNVESLSLSI
LRLIEEEAMKENSARIEAQLPLQVATFLLNEKRNSVSEIEARHGIHVVLLPNPALETPNY
DVRRVKGDDLRDSDATSSYQIIKDIEPEEETSSKRQAYAEQPAVRSVQPATPAPRPTPPA
SSNVSEAQRNAEAGFIKRMWNTLFGNNTPEATQEEEQTARSSDKPSPRRASQSRGGSGRE
RTSSRRGGSQARGRRGGRKQDDDKPQSSATAASEASTEAPGAEATEGEKQQRPAGESRRG
RRGGRRRRKPSGSKPSQQRDGTSSSGDPSNDKPTKADSDKPQKTAPNDAKPNSADAKAKP
KRRSPQTTEETPKATETSPLAAERPKPAGDVAEAGPTQTKSDHPPRDANNAPAKGDAPPK
AEAKPVVDLKPKAPEPVQKSMDLPAPAEERKETPPPVTAEKRGVHE
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgttaatcaacgcaacccagaaagaagagttgcgtgttgccctcgtcgacggccagcgc
ctctacgacctcgatatcgaacttcccggccgggaacagaaaaaggccaatatctacaaa
ggaaaaatcacccgcatcgaacccagccttgaagccgccttcgtcgacttcggctcggaa
cgccacggatttcttcctttgaaggagattgcccccgatagttatgccaaacagccgcag
gacgaaaaccgccgccccaatatcaaggagattctgaaagagggccaagaggtcgtggtc
caggtggataaggaagaacgcggcaacaaaggcgccgccctgaccacctttgtcagcctg
gccggtcgctatctggtattgatgcccaacaatccgcgcgccggcggcgtatcgcgccgc
atcgagggcgaggatcgcagcgagctgcgcgaggccatggcggccatggagatccccgaa
ggcatgggcgtgatcgtgcgtaccgccggggtgggcaaaagcaccgaagaactgcaatgg
gacctggattacctggtgcgcctatggcaggccatcgaaaaggccggccaggagcgcgcc
gcacccttcctggtgtaccaggagagcaacctgatcatccgcgccatccgcgactatttc
cgccaggacatcggcgagatcctgatcgacgccaaagaggtgtacgactacgcccaggac
ttcatgacccaggtgatgccgcacaacaagaagaaggtgaagttctacgacgacagcgtg
cccctgttctcgcgctaccaggtggagagccagatcgagaccgccttccaacacgaggta
cgcctgccctccggcggcgccatcgtcatcgaccgcaccgaggcgctggtctccatcgac
atcaactcctcgcgcgccacccagggcggcgatatcgaagagaccgccctcaacaccaat
ctggaggcggccgatgagatcgcccgtcaactgcgtctgcgcgacctgggcggcctgatc
gtcatcgacttcatcgacatgaccccgtcacgcaaccagcgcgaggtggaaaaccgcctg
cgcgaggccctgaagatggaccgcgcccgcgtccaggtggggcgcatttcgcgtttcggc
ctgctggagatgtcacgccagcgcctgcgtccgtcgctggaagaatcgatccagaccacc
tgtccgcgctgcaagggcgaaggctcgatccgcaatgtggaatccctctctctctccatc
ctgcgcctgatcgaggaagaggcgatgaaagaaaactcggcccgcatcgaggcccagttg
ccactgcaagtggccacctttctgcttaatgaaaagcgcaattcagtgagcgagatcgaa
gcccgccacggaatccacgtggtgttgctacccaatccggcactggagacgcccaattac
gacgtcaggcgggtcaagggtgacgacctcagagacagtgacgccaccagcagctatcaa
atcatcaaggacatcgaaccggaagaggaaacctcaagcaagcgccaggcctacgccgaa
caacccgcggtcaggagcgtgcagccggcgacgccggcgccgcgtcccacgccccccgcc
tccagcaatgtctcagaagcgcaacgtaatgccgaggccggctttatcaagcgcatgtgg
aacaccctgttcggcaacaacacccctgaagccacccaggaggaagaacaaacggcgcga
tcttctgacaagccgtcgccgcgccgcgccagtcaatcgcgcggcggcagcggccgtgag
cgtacctcgtcacgccggggcgggagccaagcgcgcggccgccgcggcggccgcaagcag
gatgacgacaaaccccaaagcagcgccactgccgcatctgaggcgagcaccgaagcaccc
ggcgcagaggcgaccgagggtgaaaagcagcagcgcccggcgggggaaagccgacgcggt
cgtcgcggcggccggcggcggcgcaaacccagcggcagcaagccgtcgcagcaacgggac
gggacgtcaagcagcggcgacccatctaacgacaagccgacaaaggcggattccgacaaa
cctcagaaaaccgcccccaacgacgccaagccgaactcggcggatgccaaagccaagccc
aagcgccgttctccccagacaacggaggaaacacctaaggcgactgaaacgtccccgctc
gccgcggagcgacccaagccggctggcgacgttgccgaagcaggtcccactcagaccaaa
tctgaccaccccccacgcgacgctaataatgcgcccgctaaaggcgacgcgcctcccaag
gctgaagccaaaccggtggtagacctcaaacctaaggcgcccgaaccggtgcagaaaagt
atggatctaccggcgcctgctgaagaaaggaaggagacacccccgccggtcaccgcggaa
aagcgcggcgtccacgagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (84)   

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