KEGG   Tenacibaculum todarodis: LPB136_12780
Entry
LPB136_12780      CDS       T04588                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
ten  Tenacibaculum todarodis
Pathway
ten03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ten00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    LPB136_12780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ten03400]
    LPB136_12780
Enzymes [BR:ten01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LPB136_12780
DNA repair and recombination proteins [BR:ten03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LPB136_12780
    RecFOR pathway proteins
     LPB136_12780
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_22 AAA_5 Mg_chelatase AAA_3 ResIII nSTAND3 TIP49 AAA_14 NB-ARC AAA_PrkA AAA_16 RNA_helicase AAA_18 AAA_33 Bac_DnaA TsaE Rad17 NTPase_1 DUF815 AAA_28 AAA_24 AAA_11 NACHT AAA_17
Other DBs
NCBI-ProteinID: APG66193
UniProt: A0A1L3JM67
Position
2802414..2803436
AA seq 340 aa
MNENLNPENTNLSNEDIDVEKKLRPLSFEDFSGQDQAIENLKIFVEAANQRDEALDHTLF
HGPPGLGKTTLAHILANELQVGIKVTSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLEPFTLIGATTRSGLLTAPMRARFGISSR
LHYYSTELLTTIVQRSAQILGVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGDG
NITIEIAKYALKALNVDAHGLDEMDNKILKTIIDKFKGGPVGLSTIATAVSENTETIEEV
YEPFLIQQGFIMRTPRGREVTDLAYKHLGLIKGRNQGELF
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaatgaaaatttaaatcctgaaaacacaaatctttctaatgaagatattgatgtagaa
aaaaaattgcgcccactttcttttgaagactttagtggtcaagatcaggcaattgaaaac
cttaagatttttgttgaagcagcaaatcaaagagatgaagctttagatcatacacttttt
catggacctccaggtttgggaaaaactactttggcacatattttagcaaatgaattacaa
gttggtataaaagtaacttctggaccagttctggacaagcctggagatttggctggtttg
cttacaaatctcgatgaacgagatgttttatttattgatgaaatccatcgattaagccca
attgtagaggaatacttgtattctgcaatggaagattataaaattgatattatgattgaa
tctgggccaaatgcccgtactgttcaaatcaatttagaaccattcacattaataggagca
accacccgttcaggattattaactgcgccaatgcgtgctcgttttggaataagtagtcgt
ttacattattattctacagaacttttaactacaattgtacagagaagcgcacaaatttta
ggcgttccaatttctatggaagcggcaattgaaattgcaggacgaagtagagggacacca
agaattgcaaatgcattgttacgtagagtaagagattttgcacaaataaaaggtgatgga
aacattactattgaaatagcaaagtatgctttaaaagcattaaatgtagatgcacatggc
ttggatgaaatggataataaaattttaaaaaccattatagataaatttaaaggaggtcct
gttggtttaagtactattgctacagctgtttccgaaaacacagaaactatcgaagaagtg
tacgaacctttcttaattcaacaaggttttataatgagaacacctcgtggaagagaagtt
acagatttagcgtataaacatttaggtttaattaaagggagaaatcaaggcgaattattt
tag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (38)   

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