KEGG   Tetrahymena thermophila: TTHERM_00290660
Entry
TTHERM_00290660   CDS       T01020                                 
Name
(RefSeq) elongation factor Tu GTP-binding domain protein
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tet  Tetrahymena thermophila
Pathway
tet03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TTHERM_00290660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tet03009]
    TTHERM_00290660
Ribosome biogenesis [BR:tet03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    TTHERM_00290660
SSDB
Motif
Pfam: GTP_EFTU EFG_C GTP_EFTU_D2 EFG_III MMR_HSR1 EFG_IV DUF4347 RsgA_GTPase
Other DBs
NCBI-GeneID: 7844054
NCBI-ProteinID: XP_001018683
TGD: TTHERM_00290660
UniProt: I7M8M1
AA seq 1162 aa
MLNSDTNRLKYILQLQKNPKNIRNISIVAHVDHGKTTLSDSLISSNNIFSKQLVGELHYL
DSREDEQQRGITMKSSAISLIYRQQQEDFLINLIDSPGHVEFSSEVSSALRLTDGALVVV
DALEGVSAQTYTVLKQCYDEKVKSVLVLNKIDKLKYELYQTPEETYQHLQMIIEQVNAVI
SSFINQEKEKALTVALENQKSNDIDSTKIEGNDDDFYKEAEAAYFSPEKGNIVFCSALDC
WSFRLSDFAEIFAEKLELPKKLLNKVLWGEYYYNPKTKKVTRNPPNDKARPLFESFIIKN
IWALYDLVLNQETDKISKFCQTFKLKDLTDSMKTNMSKDIKEKKKCVSYLMSQWLPLDRA
ILACAVEWLPSPIQGQKDRLKVISKKLASQKEMKNCQEYALMRKAIEECDNSEEAPVVAF
ICKMVAVNKAHFNERNLLSLQEMSNDPQTRYMGFARLYSGLLRRGKTIYIIGPKAHQNKE
GSQNTQQNSIFPFTVERLYTMMGPNQEGVKEVFAGNVFSIGGLDDLVFKSATVSSFDCCP
SLTPINLGAKGILKVALTTHNLDENSLLIEGLKKLNKSDPSVEVFTESNGNIILSTCGQV
HMERCINDLEKTMAKIKIKVSDPIISFKETVISKNLKNKREAKNEYQKESEDEQEEDFET
LQRLAKEKFQKECEDVEIVDIQNEKDEDIRYGLLDEEKEKDKFKYKVEKLIKKKDLTNKG
KALAMLSRVNILDIINKKNYICQLIPNGKIMLKVRCIGMKFELAEWLEKNSKKMYKFFFD
MSKKREPQEILDFLKDFEDQVNEIVNEKKLKDLIMNNLVSFGPNRYGPNMLIMNHIQKEE
SLLEKLRKKATQACIEEQNNQNGENGQQNGEIGGDNQQKDEKISSINKKLNTFKTWSTIE
QLYKVTPEEIQNSIVYGFDTAVSAGPLCMEQMMGVIYILEEIQVMDDEKKENENSSPEKE
RKEENQIASERTLDEKEEIASDSTSNAAHKMLNQPFGPLNGQVISTMKDCCFECFLGAQP
RIVEGMYMCYVQTHQENYGKSFEVLNKKRAKILEEELQESSNIFLIKAHLPISESFDFYN
LMQDNTSGRINSQLIFDTWKILEIDPFYVPQTQEEIEEHGATVNVPNFAKDLIEKIRKRK
GLSTEEKVVVAAEKQRNLSKKK
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgttgaattcagataccaatagattaaaatacatattgtagctctaaaaaaacccaaag
aatattagaaacatatctatcgtcgctcacgttgatcatgggaaaactacattgtcagat
tctctaatttcatctaacaatatcttctccaagcaattagtaggagagctgcattattta
gactcaagagaagatgaatagtaaagaggtattacaatgaaatcatcagcaatttctctt
atctatagatagcaacaagaagatttcttaattaatttgattgattcaccaggtcacgta
gaattttcttctgaagtcagtagtgctttgagattaactgatggagcactagtagtagtt
gatgctttggaaggtgtgtctgcataaacctatacagtattaaaatagtgctatgatgaa
aaggttaaatctgttctggtcttaaataaaattgacaagttaaaatatgagttgtaccag
actcctgaagaaacatattagcatttataaatgattattgaataagttaatgccgttatt
agttctttcattaactaagaaaaagaaaaggctcttacagttgctctagaaaattaaaaa
agcaatgacatagactcaactaaaattgaaggaaatgatgatgatttctacaaagaagca
gaagcagcttatttctcacccgaaaaaggtaacatcgtgttttgttctgctcttgattgt
tggtcatttagactttctgattttgctgaaattttcgcagaaaagcttgaattacctaaa
aaactgttaaataaggtgctttggggtgaatattactacaaccctaaaactaaaaaagta
acaagaaaccctccaaacgataaggccagacctctttttgagagctttattattaaaaac
atttgggcactttatgatttagtccttaactaagaaactgataagattagtaaattctgt
taaacttttaagctcaaggatttaactgactccatgaaaaccaacatgtctaaagacatc
aaagaaaaaaagaaatgtgtttcttatcttatgagttaatggttaccattagacagggct
attcttgcttgtgcagtagagtggttgccttcacctatttaaggtcaaaaagatagactt
aaagttatctctaaaaaattggcatcataaaaagaaatgaagaactgttaagaatatgct
ttgatgagaaaggctatagaagaatgtgataactcagaagaagcgcccgttgttgctttt
atttgcaaaatggttgctgtcaacaaggctcattttaatgaaagaaatttgctttctttg
taggaaatgtctaatgatccataaactcgttatatgggttttgccagattatatagtggc
ttattgagaagaggaaagactatttatattattggtcctaaagctcaccaaaacaaggaa
ggttcttaaaatacttaacaaaatagcatattccctttcactgttgagagattatacact
atgatgggacctaattaagaaggtgtcaaggaagtttttgctggaaacgttttttcaatc
ggaggtttggatgatcttgtttttaaatcagccactgtttccagttttgattgctgtccc
tctttaactcctataaatcttggtgctaaaggtatccttaaggtagcattgactactcat
aatttagatgaaaattcactcttaatcgaaggtttaaagaaattaaacaagagtgatcct
tcagtagaagttttcacagaaagtaatggtaatattatactttctacatgtggttaggta
catatggaaagatgcattaatgaccttgaaaaaactatggctaaaattaaaattaaagtt
tcagatcctatcatttcatttaaggagacagtaataagcaagaacttaaagaataagaga
gaagcaaagaatgaatattaaaaagaaagtgaagatgaataagaagaagattttgaaact
ttgtagagattggctaaagaaaaattctaaaaagaatgtgaagatgttgaaattgttgat
atttaaaatgaaaaagatgaagatattagatatggtctgcttgacgaagaaaaagagaag
gacaaatttaaatataaagtcgaaaaattaataaaaaagaaagacttaaccaataaaggt
aaagctcttgctatgttaagtagagtgaacatattagatatcataaataaaaagaattac
atttgttagttgattcctaacggtaaaattatgttgaaagttagatgcataggcatgaag
tttgagttagctgaatggcttgagaaaaactctaaaaaaatgtataaattcttctttgat
atgagcaagaaaagagagccttaagaaatacttgatttcttaaaagattttgaagattaa
gtgaatgaaatagtaaatgaaaagaaattaaaagatctgattatgaacaatcttgtctcc
tttggtcctaacagatatggccctaacatgctcataatgaatcacatacaaaaggaagag
tctctccttgaaaaactgagaaagaaagctacctaagcatgtattgaagagtaaaacaat
caaaacggagagaatggatagtagaatggtgaaattggaggagacaatcaataaaaagat
gaaaaaatctcaagcattaataaaaagcttaatacttttaagacatggtcaacaatagaa
taattatacaaagttactcctgaagaaatataaaactcaatagtttatggttttgacact
gctgtttcagctggtccactttgtatggaataaatgatgggtgttatatatatccttgaa
gaaatttaagtgatggacgatgaaaaaaaagaaaacgaaaactcttcacctgaaaaagaa
agaaaagaagaaaaccaaattgcttctgagagaactttagatgaaaaagaagaaatagct
tctgattctacaagtaatgcagctcacaaaatgcttaattagccttttggacccttaaac
ggataagttatatcaacaatgaaagactgctgttttgaatgtttcttaggggcataacct
cgtattgttgaaggtatgtatatgtgttatgtacaaacacattaggaaaattatggcaaa
tcattcgaagtgctaaataaaaagagagccaaaatcttggaagaagagttataagaaagt
agtaatattttcctaattaaagctcatcttcctatctcagagtcatttgatttttacaat
ctaatgtaagataacacctccggtagaataaattcttagcttatttttgatacctggaaa
atcctcgaaatagatcctttctacgtccctcaaactcaagaagaaattgaagaacacgga
gcaacagttaatgtacctaattttgctaaggatctaattgaaaaaatcagaaagagaaag
ggtttatctactgaagaaaaagtagttgttgcagcagaaaagcaaagaaacctttccaaa
aagaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (93)   
   KEGG ORTHOLOGY (1)   
   RefGene (88)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   TGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (108)   

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