KEGG   Tetrahymena thermophila: TTHERM_00637660
Entry
TTHERM_00637660   CDS       T01020                                 
Name
(RefSeq) tetratricopeptide repeat protein
  KO
K12607  CCR4-NOT transcription complex subunit 10
Organism
tet  Tetrahymena thermophila
Pathway
tet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TTHERM_00637660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tet03019]
    TTHERM_00637660
Messenger RNA biogenesis [BR:tet03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     TTHERM_00637660
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_14 TPR_12 TPR_8 ANAPC3 TPR_20 TPR_11
Other DBs
NCBI-GeneID: 7832844
NCBI-ProteinID: XP_001032427
TGD: TTHERM_00637660
UniProt: Q22HD7
AA seq 825 aa
MQKELEVESSQSLAIQAYDHYQNGEFDSALAKMQKVKNLKQQQNESQCIRVQENILFCQY
SKLDGKMSDVQLLSQLHELIQDMMKINEKEKQISAANKNNKKSTGKQTANNDEVSSNSKK
EDDTILRYNYSVILLNIGKFEKAFDVLLKIYKEKKEEDNFAIVKAKLLLLELALQQKHFT
LVIQILNTFKTQKQLKEIKDPKDIKKQKSYYVSVILGNQIHSLEYPDNTCKYEQQFYLGM
IKAQLSAQLGDHKMARKHIKQSQKYLIKFVTVLTSNSETSPSYHPKLCSIIHLHALSLFN
YTKAQIAYYEQNFQKVFKLISPTCVLDAQLLANSDEYYKYFQIYQVFQLNNIGCAHLRMK
KSSMAVFYFNKAIQLAHDFSNKQNSKKCELFPNNVRQIQLLEKNILSKMNHLYYNLGLAL
FEMKKYEKAYYYLSQASEQRTSSYSIWYRLGEIQICQYHEILSKNFTNSECGIYMDQFDT
QDIKYSYQTDVHQAMRKNSKTNLKEDTIQEEHSSKNYFKRFSLCNQDKVICLQNDNDSDE
ARIQAFQRNKPQNKIYYIDKQLQEKLDLALKCFKNALHLIEGKIEKINAQIKNDTKYFIY
VDSDKKTTSNEDLTEQQFLNLKDSIFSQRQRMHQSLLTYIAYTHLCRQEYNQALIYSQKA
YKLDYISVQNKSCCINYQLECYMNLNQPEEAIKLINIDTNYLDSVDMMHRNISGVNKSEI
SFSNAAISFGLNTVAFYLKNNEVTKAQTTLNNILSKLNIQINSPLAQIPTIILNLLIYLY
LLQNNIQSALTLVKRRRLITFVSENSNKPLMRITKQSYLNYVHSV
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgtaaaaggagttggaagtagaatcgtcataatctttagcaatttaggcatatgatcac
tatcaaaacggtgaattcgatagtgcattagcgaagatgcaaaaagtaaagaacttgaag
caataacaaaatgaatcatagtgcattagggttcaagaaaacattttattttgtcaatat
tcgaaattagatggcaaaatgagtgatgtttaattattgtcttagttgcatgagctcatt
taagacatgatgaaaatcaatgagaaagaaaaacagatatctgcagccaataaaaataat
aaaaaaagtactggtaaataaacagcaaacaatgatgaagtttctagtaactcgaaaaag
gaggatgatacgatattaagatacaattactctgttattttacttaatattggaaaattt
gaaaaggcatttgatgttttactaaagatttataaagagaagaaagaagaagataatttt
gcaattgtaaaagctaaacttctcctattagaattggctctatagcaaaaacactttact
ctcgtgatttaaatcctaaatacttttaagacttaaaaacagcttaaagaaattaaagat
cctaaagacataaaaaagtaaaaaagctattatgtttcagttattttgggtaatcaaatc
catagcttagaatatccagataatacttgcaaatatgaatagcaattttatttaggaatg
attaaagcataattatcagcttagctaggtgatcataaaatggctagaaagcacattaaa
tagagctaaaagtatcttataaaatttgtcactgttttaactagcaatagcgaaacatcc
ccatcttatcatcccaagctatgctctattattcacttacacgctctttctttatttaat
tatactaaagctcaaattgcttactatgaatagaactttcaaaaagtatttaaattaata
tcccctacctgtgtcttagatgcccaactgttagcaaattctgatgaatattacaaatat
ttctagatctactaggtgttttaattgaataatattggttgtgctcatttgaggatgaaa
aagagttcaatggcagttttttatttcaataaagcaatataacttgcacacgatttcagc
aataaacaaaactctaaaaaatgtgaattattcccaaataacgttagataaatataatta
cttgaaaagaatatcctgtctaaaatgaatcacctctattacaatttaggattagcactc
ttcgaaatgaagaaatatgaaaaagcttactattatttaagttaagcttcagagtaaaga
acttctagttatagcatatggtatcgtcttggagaaatttagatttgctagtatcatgaa
attctttccaaaaatttcacaaatagcgaatgcggcatatatatggattaatttgataca
caagatataaaatactcctactagacggatgttcatcaggctatgagaaagaacagcaag
acaaacttgaaagaagatacaatttaagaggagcactcgtctaagaattattttaaaaga
ttctcgttatgcaatcaagataaagtaatctgcttgtaaaatgacaatgacagtgatgaa
gcacgtatacaagcattctaaagaaataaaccataaaataagatatattatattgataag
cagctttaagaaaaactagatttagcattaaagtgctttaaaaacgctctgcacttgatt
gaaggaaaaatagaaaaaatcaatgctcaaattaagaatgatacaaaatattttatttat
gtcgacagtgataaaaagacaacttcaaatgaagacttaactgaacagtaatttttaaat
ttaaaagactctattttttctcaaagacaacgaatgcatcaatctctccttacttatatt
gcttacactcatctctgtcgacaagaatataactaagctcttatttatagccaaaaggca
tataaattagattatattagtgttcaaaataaatcctgctgtataaattattaattagag
tgctatatgaacctcaattaacctgaagaggcaattaaattaataaatattgacactaat
tatttggattctgttgatatgatgcacaggaatatttcaggtgtaaataaatcagaaata
agcttttctaatgcagctatttcgtttggattaaatacagttgctttttacctgaaaaat
aatgaagttacgaaggcttaaacaaccctaaacaatattctatcaaagttaaacatataa
ataaactctcccttggcacaaattccaacaataatacttaatctcttgatttatctctac
cttttataaaacaatatacaatcagcattaactcttgttaaaagaagaagattaatcaca
tttgtaagtgaaaattcaaataaacctctgatgaggataacaaaacaaagctatttaaat
tatgtacacagtgtatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   TGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (63)   

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