KEGG T01020: TTHERM

Tetrahymena thermophila: TTHERM_00865240

Entry

TTHERM_00865240 CDS T01020

Definition

DNA ligase I, ATP-dependent (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

tet Tetrahymena thermophila

Pathway

tet03410	Base excision repair
tet03420	Nucleotide excision repair
tet03430	Mismatch repair
tet03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:tet03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:tet03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:tet03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:tet03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C

Other DBs

NCBI-GI:

NCBI-GeneID:

TGD:

UniProt:

AA seq 635 aa
MIKKLLYLPKQSLLSSLIFSKFCTQFNSKSIQSFYFLAKQFDDISKISSRNSGIEAIETL
MNDYIQGGDNELFIQMVRLLTCKVDSEEIQIANSSLVEILKVVYPQEDITKFLFEKGDIG
LYAKEMLEKKLEKEGNNRTEKNHLSILEVTSFFEKLKNLQGDRSRLEKQELIIDFLKKIQ
DPLEIQYFIRILSKSLRIGVSEKSIIKALTNINKKKKNSLDSLLKNVQDKIFGYNTALHT
DIQIGTPVPPMLAKPVSDFDELLKFLKKYESKKVSLELKYDGERCQVHYGKKKGIKLFSR
NLEIQNEKYPQLVQQLEKYFQKNNSVEDCILDGEIVVTDSKGNIKSFQEQQQNRKRKQDS
NKVVAFDEDNIEKIYLFDILFLNACEQNTKEQLYRKSLIKENFPIEGPVNHAESKIFDLS
IQKDFDELKKLVKQYIDQKEEGAMVKSLDSNTFYDNNGRTQWAKLKKQVLSGGLADTFDV
IPIAAYYGKGKRSGVYGSYLLACYDDKKKEYVALCKIGTGFSDQFLQDSTDRLKQKVCSQ
KPKEYSVHRTFKPDVWFQKDAEVWEVESDSLSSSPIYTIGKMNYSDNGISLRFPRFLRVR
DDKTTEQSTKTYQNNSKDQKGDHGDKGEEEEEGDK

NT seq 1908 nt +upstreamnt +downstreamnt
atgataaagaaattattgtatttacccaagtaaagcttgttatcatctttgattttttct
aagttttgtactcaatttaactccaaatctatttagagcttttattttttggctaaatag
tttgacgatatctccaaaatatcttctagaaattctggaatagaagctatagaaactttg
atgaatgattacatttaaggaggagataatgaactatttatctaaatggtacgcttacta
acctgcaaagtagatagtgaagaaatataaatagctaattcttccttagttgagatattg
aaagttgtatatccctaagaggatataactaaattcctttttgaaaaaggagatatagga
ttgtatgcaaaagaaatgcttgaaaaaaaacttgaaaaagaaggaaataatcgaactgaa
aaaaatcatttaagtattttagaagttacgagcttttttgaaaaactgaagaatttataa
ggtgatcgctcgagacttgaaaagcaagaacttatcatagattttttgaagaaaatctaa
gatccacttgaaatataatattttatcagaatcctttctaaaagcctaaggataggtgta
agtgagaaatctattataaaagcattaacaaatatcaataaaaagaagaaaaactctttg
gattcactgcttaaaaatgttcaagataaaatatttggatataatactgccttacatacc
gatatttaaataggaactcctgtgcctccaatgctagccaaaccagtttccgattttgac
gaacttttaaaatttttaaagaagtacgaaagtaaaaaagtctctcttgaactaaaatat
gatggagagagatgttaggttcattatggtaaaaagaaaggaattaaattatttagtaga
aatttagaaatctaaaatgagaaatatccataactagtttagcaattagaaaaatatttt
tagaaaaataacagtgtagaagattgcatattagatggagagattgttgtaacagattct
aaaggaaatattaaatcattttaagaacaacaacaaaatagaaaaaggaaataagattct
aacaaggtagttgctttcgatgaagataatattgaaaagatttacttatttgatatcctg
tttttaaatgcatgtgagcaaaataccaaggaataactttacagaaagagcttgattaaa
gaaaattttcctattgaaggaccagttaatcacgctgaatcaaaaatatttgatcttagc
atataaaaagattttgatgagctaaaaaaattagtaaaataatatattgattaaaaagaa
gaaggtgctatggttaaatcgcttgattctaatacattttatgataataatggaagaact
tagtgggcaaaattaaagaagcaagttttgtcaggaggtttagctgatacatttgatgtt
attcctattgctgcatactatggaaaaggcaagagatctggtgtctatggatcatatcta
cttgcttgttatgatgacaaaaagaaagagtatgtggctttgtgtaagataggtacaggt
ttttctgatcaatttttataagattcaacggatagactgaaataaaaagtatgcagttaa
aaacctaaagaatactctgtgcatagaacttttaagcctgatgtttggttttaaaaagat
gctgaagtgtgggaagtagagagtgatagtctttcatcatctcctatttatacaatagga
aaaatgaattatagtgataatggaatatcccttcgtttcccaagattcttacgtgtaaga
gatgataaaactactgaacaatcaacaaaaacatattaaaataattcaaaagattaaaaa
ggagaccatggagataaaggagaagaagaagaagaaggagataagtga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   TGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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