KEGG   Tessaracoccus sp. T2.5-30: BKM78_03260
Entry
BKM78_03260       CDS       T04747                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tez  Tessaracoccus sp. T2.5-30
Pathway
tez03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BKM78_03260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tez03400]
    BKM78_03260
Enzymes [BR:tez01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BKM78_03260
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BKM78_03260
DNA repair and recombination proteins [BR:tez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BKM78_03260
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27 DZR_2 DZR Zn_ribbon_SprT
Other DBs
NCBI-ProteinID: AQX15057
UniProt: A0A807N3T1
Position
complement(680017..680856)
AA seq 279 aa
MPELPEVEVVRRGLDAHVTGRRILGTSVLHPRPVRAHPVGPDAFAADLTGRRIDAVRRRG
KYLWLALGDDALVIHLGMSGQLRVNAPGDAHARHTRVVVDLDDGTQLRFVDQRMFGGLEL
RPGMAVCPVPHIALDPFDPEFDAAATAAALRRRRTQVKRALLDQTLVSGIGNIYADEALW
RAGVHYAHPTASLTPDQATSVLAAASSVMAEALAEGGTSFDSLYVNVNGESGYFSRSLAV
YGREEQPCTRCGTPIARRAFMNRSSHYCPSCQPVAKELP
NT seq 840 nt   +upstreamnt  +downstreamnt
gtgcctgaactgccggaggtcgaggtcgtccggcgcggcctcgacgcccacgtcacggga
cgtcggatcctcggcacctccgtgctccatccccgccccgtgcgggcgcaccccgtcggc
cccgacgcctttgccgccgacctcaccgggaggcgcatcgacgcggtgcgccgccgcggc
aagtacctgtggctcgcgctcggtgacgacgccctcgtcatccatctggggatgagcggc
cagctccgggtcaacgccccgggcgacgcccacgcccggcacacgcgcgtcgtcgtcgat
ctcgacgacgggacgcagctgcgtttcgtcgaccagcgcatgttcggtggcctggagctg
cggccggggatggcggtgtgcccggtgccgcacatcgctctcgacccgttcgatcccgag
ttcgacgccgccgcgaccgcggccgcgctgcgccgccgccgcacccaggtcaagcgtgcg
ctgctggatcagaccctggtctcgggcatcggcaacatctacgccgacgaggctctgtgg
cgcgccggcgtccactacgcccaccccaccgcctccctcaccccggaccaggccacgtcg
gtcctcgcggccgcctcctccgtcatggccgaggccctcgccgagggcggcacgtccttc
gactcgctctacgtcaacgtcaatggtgagtccgggtacttctcccggtcactggccgtg
tacggtcgcgaggagcagccctgcacgcggtgcggcaccccgatcgcccgccgggcgttc
atgaaccgcagcagccactactgcccgtcctgccagccggtcgcgaaggagctcccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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