KEGG   Thermobifida fusca: Tfu_0652Help
Entry
Tfu_0652          CDS       T00265                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
tfu  Thermobifida fusca
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:tfu00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Tfu_0652
Enzymes [BR:tfu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Tfu_0652
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Tfu_0652
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
754525..755415
Genome map
AA seq 296 aa AA seqDB search
MPELPEVEVVRRGLEKWVVGASFGEVEVLHPRAVRRHAPGAADFAARVSGCGVTEARRRG
KYLWLTLDSGEALLAHLGMSGQLLVQPRHAAAERHLRVRLPLTARQGHDPEAPQELRFVD
QRTFGHLLVDRLVDDGTGTGLPSVISHIARDPLDPAFDEDAFAAALCRKRTELKRALLDQ
SLISGIGNIYADEALWMSQLHWATPTEALSRSQVATLLAAVREVMVAALAQGGTSFDSLY
VNVNGESGYFARSLNAYGRNDQPCARCGTPIQRETFMNRSSYSCPRCQPRPRHARA
NT seq 891 nt NT seq  +upstreamnt  +downstreamnt
atgccggagctgcctgaagtcgaggtggtgcggcgcggcctggaaaagtgggtggtcggc
gcgtcgttcggcgaggtcgaggtcctgcatccgcgtgcggtccggcgccacgcgccgggt
gcggcggatttcgccgcgcgcgtcagcgggtgcggggtcacggaggcgcgccgccgcggc
aagtacctctggttgaccttggactccggggaggcgctcctcgcccacctggggatgagc
ggccaattgctggtccagccgcgccatgccgcagccgaacggcatctgcgggtccgcctg
cccctgacggcgcgtcaaggccacgacccggaggccccgcaagagctgcgtttcgtcgac
cagcgcacgttcggccacctgctcgtggaccggctggtggatgacggcaccggtaccggg
ctgccttcggtgatctcccacattgcgcgcgaccccctggaccctgctttcgacgaggac
gcgttcgccgcggcgctgtgccgcaaacgcactgagctgaaacgcgccctcctcgaccag
tccctcatcagcgggatcggcaacatctacgccgatgaagcgctgtggatgtcccaactg
cactgggcgacccctaccgaggccctgtcgcgctcccaggtcgccacgctgctggccgcg
gtccgcgaggtgatggtcgcggccctggcccagggcgggacctcgttcgacagcctttat
gtgaacgtcaacggggagagcggctattttgcgcgcagtctcaacgcctacggccggaac
gaccagccgtgtgcacgctgcggcacgccgatccaacgggagacgttcatgaaccgctcg
tcgtacagttgtccgcggtgccagccgagaccgcggcacgcgcgagcgtga

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