KEGG   Thermococcus gammatolerans: TGAM_1950
Entry
TGAM_1950         CDS       T00920                                 
Symbol
srp54
Name
(GenBank) Signal recognition particle, subunit SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tga  Thermococcus gammatolerans
Pathway
tga02024  Quorum sensing
tga03060  Protein export
tga03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:tga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    TGAM_1950 (srp54)
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    TGAM_1950 (srp54)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TGAM_1950 (srp54)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tga02044]
    TGAM_1950 (srp54)
Enzymes [BR:tga01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     TGAM_1950 (srp54)
Secretion system [BR:tga02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   TGAM_1950 (srp54)
  Eukaryotic Sec-SRP protein
   TGAM_1950 (srp54)
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA AAA_22 MeaB MobB Glyco_transf_4 Zeta_toxin nSTAND3 AAA_17 cobW AAA_30 AAA_16 NTPase_1 AAA_33 ResIII ATP_bind_1 AAA_18 IMPDH MMR_HSR1 ParA LpxK Nop52 YqeC APS_kinase Thymidylate_kin AAA_31 AAA_19 VirC1 TrwB_AAD_bind Fe-ADH Glyco_trans_4_4 DUF1611 AAA_7 AAA NACHT KTI12
Other DBs
NCBI-ProteinID: ACS34452
UniProt: C5A233
Position
complement(1873210..1874556)
AA seq 448 aa
MALEKLGKALNSALRKLARSSTVDEALIREVVRDIQRALIQSDVNVRLVLQLTKRIQERA
LNEKPPAGVSPREHVIKIVYEELTKLLGKEAVPLEIREKPTILLTVGIQGSGKTTTIAKL
ARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPGEKDAIKLAREGVEYFKD
KGVDVIIVDTAGRHKEESGLIEEMKQISEAIKPHEVILVIDGTIGQQAYHQALAFKEATP
IGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGEKIDDLEPFDPKRFVSRLLGLGDIQ
GLLEKIEELQKEQEFKEEDVEKFLRGKFNLKDMYAQLEAMQKMGPLKQILQMIPGLGYSL
PDEAVRVGEEKLRRYRIIMDSMTEEELENPDIINYSRIKRIARGSGTSTREVRELLAQYN
QMRKMFKNLDKRKLAKMAKKFNFGGLGI
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcacttgaaaagctcggcaaggctctaaacagtgccctgagaaagctggcgagatcg
agtacagttgatgaggcgctcatcagagaggtagttagagacatccagagggccctcatt
cagtccgacgttaacgtaaggcttgttctgcaactgacgaaaaggatacaggaaagggcc
ctcaacgagaaacccccggcgggtgttagtccaagggagcacgtcattaagatagtttat
gaagagctgacgaagctcctgggaaaggaagcggttccccttgagatacgggagaagcca
acgatattgctcaccgttgggattcagggatctggtaagacgacgacgatagccaaactc
gccaggcaccttcagaagaggggctacaaggtgggcctcgtgtgcactgacacctggcgt
cccggtgcgtactaccagctcaagcagcttgttgagccctacaacatagaggtcttcggc
gatcccggcgaaaaagacgccataaaacttgcaagggagggcgttgagtacttcaaggat
aagggagtggacgttataatcgtcgatacagcggggaggcacaaggaggagtcaggcctt
atagaggagatgaagcagataagcgaggccataaaacctcacgaggtcatcctcgtcatt
gatggaactataggccagcaggcctatcatcaggccctcgcctttaaggaggccacaccg
ataggctcgataatcgtcacgaagcttgatggttctgccaaaggcggtggggcgctctcg
gctgtggcggcgactggggcaccaataaagttcataggtgttggtgagaaaatagacgat
ctcgagcccttcgatccgaagaggttcgtttcaaggttgctgggtctgggtgacattcag
ggtctgctcgagaagatcgaagagctgcagaaggagcaggagttcaaggaggaggacgtt
gagaagttcttgaggggtaagttcaacctcaaggacatgtacgcccagcttgaggcaatg
cagaaaatgggcccgctcaagcagatactccaaatgatacccggcctcggctactccctt
ccggacgaggccgtaagagtaggcgaagaaaagctcaggcgataccgcattataatggac
tccatgacggaagaggagctggagaacccggacataataaactactccaggataaagagg
atagccaggggttctggaacatcaacgcgcgaggtcagggagcttttggcccagtacaac
cagatgcgaaaaatgtttaagaacttagacaaaagaaaattggcaaagatggccaagaag
ttcaactttggagggctggggatatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (38)   
   Pfam (38)   
All databases (51)   

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