KEGG   Taeniopygia guttata (zebra finch): 100218243
Entry
100218243         CDS       T01082                                 
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
  KO
K12479  vacuolar protein sorting-associated protein 45
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100218243 (VPS45)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    100218243 (VPS45)
Membrane trafficking [BR:tgu04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    100218243 (VPS45)
SSDB
Motif
Pfam: Sec1 B12-binding
Other DBs
NCBI-GeneID: 100218243
NCBI-ProteinID: XP_004174939
Ensembl: ENSTGUG00000004493
Position
25:1846077..1859555
AA seq 570 aa
MNAVLAVRQYVSKMIEDSGPGMKVLLMDRETTGAVSVVYTQSEILQREVYLFERLDSPNR
EPMKHLKAICFLRPTKENVELLVQELRRPKYSIYFIYFSNVISKSDVKALAEADEQEVVA
EVQEFYGDYIAVNPHVFSLNLLGCCRGRSWDPAQLTRTTQGLTALLLSLKKCPMIRYQLS
SEPAKRLAECVKQVITKEYELFDFRRTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGTNIKNLMEDFQRRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVAERNLLEVSEVEQELACQ
NDHSSALQSVRRLLQSPRVSELDAARLVMLYALRYERHASSGLPALLEELRGRGGTDRYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGIENVYTQHQPLLQETLDQLIKG
KLKDSQYPYLGPNTLRDRPQDIIVFLIGGATYEEALTVFNLNRSNPGVRIVLGGTTIHNT
RSFLEEVTAAGFRGRSTDSSQVPPRSSSRR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgaacgcggtgctggcggtgcggcagtacgtgtccaagatgatcgaggacagcggcccc
ggtatgaaggtgctgctgatggaccgggagacgaccggcgccgtgagcgtggtgtacacc
cagtccgagatcctgcagcgtgaggtttatctcttcgagcgcctcgactcgcccaacagg
gagcccatgaagcacctcaaggccatctgcttcctgcggcccaccaaggagaacgtggag
ctcctggtgcaggagctgcgaaggcccaagtacagcatctacttcatctatttcagcaac
gtcatcagcaagagcgatgtgaaggccttggccgaggccgatgagcaggaggtcgtggct
gaagtccaggagttctacggcgactacattgcggtgaacccacacgtcttctccctgaac
ctcctgggctgctgccggggccgcagctgggacccggctcagctcaccaggacgacccaa
gggctcactgctctgctcctgtccctgaagaagtgccccatgatccggtaccagctctcc
tcagagccagcgaagcgcttggccgaatgtgtgaagcaagtgatcacgaaggagtacgag
ctgtttgatttccggcgcaccgaggtccctcccctgctcctcatcctggaccggtcggac
gatgccatcaccccactcctgaaccagtggacgtaccaggccatggtccatgagctgctg
gggatcaacaacaaccgcatcgacctgtcccgggtgccggggatcagcaaggacctgcgg
gaggtcgtcctgtcagctgagaacgacgagttctacgccaacaacatgtacctgaacttt
gccgagattggcaccaacatcaagaacctgatggaggatttccagaggaggaagccaaag
gagcagcagaagctggagtccatagcggatatgaaggcctttgtggagaactaccctcag
ttcaagaagatgtcaggcacagtgtccaagcacgtgacagtggtgggggagctgtcccgg
ctggtggcggagcggaacctgctggaggtgtcagaggtggagcaggagctggcctgccag
aatgaccattccagtgccctccagagcgtgcggcggctgctgcagagcccgcgggtgtcg
gagctggacgcggcacggctggtgatgctctacgcgctgcgctacgagcgccacgccagc
agcggcctcccggcactgctggaggagctgcgcggccgcggcggcaccgacaggtaccgc
aagctggtgtctgccgtggtggagtacggagggaagcgtgtccgaggcagtgacctgttc
agccccaaggatgccgtggccatcaccaagcagttcctcaaaggcctgaagggcatcgag
aacgtgtacacccagcaccagcccctgctccaggaaaccctggaccagctcatcaaggga
aagctcaaggacagccaatatccctacctgggccccaacacactccgggacaggcctcag
gacattatcgtgttcctcatcggaggggccacctacgaggaggctctgaccgtgttcaac
ctgaaccgctccaaccccggcgtccgcatcgtcctgggtgggaccaccatccacaacacc
aggagcttcctggaggaggtcacagccgcaggattccgcggtcgaagcactgacagctcc
caagtcccaccaaggtccagcagccgacggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system