KEGG   Taeniopygia guttata (zebra finch): 100218781
Entry
100218781         CDS       T01082                                 
Symbol
TRIM71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgu03019]
    100218781 (TRIM71)
   04121 Ubiquitin system [BR:tgu04121]
    100218781 (TRIM71)
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100218781 (TRIM71)
Messenger RNA biogenesis [BR:tgu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100218781 (TRIM71)
Ubiquitin system [BR:tgu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    100218781 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-RING_5 zf-C3HC4 zf-RING_UBOX DUF4094
Other DBs
NCBI-GeneID: 100218781
NCBI-ProteinID: XP_030120878
Ensembl: ENSTGUG00000003784
Position
2:complement(41508850..41569585)
AA seq 878 aa
MASFPESDFQICPLCKEMCGSPAPLSSNSSTSSSSSQTSSSSGGGGGSSCGGPPRRLHVL
PCLHAFCRQCLEAQRHPGAGDALKLRCPICDQKVVISEPSGMDALPSSNFLLSNLLDVVV
VAAAADEQKNGRAAGAGPAAGSGGGGGSNNRHHGRPPPGPPRAAGSSPAAAASAAPSSTS
SSSSSSGGGGGSAALLLRRPHSRQGEPRCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRV
RLTKDHFIERFAAGPAAAGPAAPLALSPPYPASPYNILSVFPDRASYCQHHDDEVLHFYC
DTCSVPICRECTMGRHVGHSFIYLQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVA
EQVEMKAKVVQSEVKVVTTRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNK
LDNTISAVQQVLEEGRTMDILLARDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYM
AIKSMGFVSSGAFAPLTKATGEGLKRALQGKVASFTVIGYNHDGEPCLSGGDMISAVVMG
PDGNLFGADVSDQQNGTYLVSYRPQLEGEHLVSVMMCNQHIENSPFKVMVKSGRSYIGIG
LPGLSFGSEGDSDGKLCRPWGVSIDKEGFIIVADRSNNRIQVFKPCGTFHHKFGTLGSRP
GQFDRPAGVACDISRRIVVADKDNHRIQIFTFEGQFILKFGEKGAKNGQFNYPWDVAVNA
EGKILVSDTRNHRIQLFGPDGVFLNKYGFEGVLWKHFDSPRGVTFNHEGHLVVTDFNNHR
LLVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCK
FGTQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILVF
NT seq 2637 nt   +upstreamnt  +downstreamnt
atggcttcgtttccagagtccgacttccagatctgcccgctgtgcaaggagatgtgcggc
tcgccggctcccctctcgtccaactcctccacctcctcgtcctcctcgcagacctccagt
tcctccgggggcggcggcggctcctcctgcgggggcccgccgcggcggctccacgtcctg
ccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggcaccccggcgcgggg
gacgcgctcaagctgcgctgccccatctgcgaccagaaggtggtgatctcggagccctcg
ggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtcgtcgtc
gtggcggccgccgccgacgagcagaagaacggccgcgccgccggggccggccccgccgcg
gggtcgggcggaggcggcggcagcaacaaccggcaccacggccgcccgccgccggggccg
ccccgcgccgccggctcctcgcccgccgccgccgcctcggccgcgccctcctcgacgtcg
tcgtcgtcctcctcctcgggcggcggcggcggctcggcggcgctcctgctgcggcggccc
cacagccggcagggcgagccccgctgcagctcctgcgacgagggcaacgccgccagctcc
cgctgcctcgactgccaggagcacctgtgcgacaactgcgtgcgggcgcaccagcgcgtc
cgcctcaccaaggaccacttcatcgagcgcttcgccgccggccccgccgccgccggcccc
gccgcgccgctcgctctcagcccgccctaccccgcctcgccgtacaacatcctctctgtc
ttccccgaccgggccagctactgccagcaccacgacgacgaggtactacatttctactgt
gatacctgttctgtccccatatgtcgggaatgtaccatgggacgacatgtgggtcacagc
tttatctacctccaagatgccctgcaggactccaggactctcaccattcagctcctggca
gatgctcagcaaggacgacaagctattcaactgagtattgagcaggcccaggctgtggca
gagcaagtcgagatgaaagccaaagtggtgcagtctgaagtcaaagtggtgaccactaga
cataagaaggccttggaggagcgggagtgtgagctgctctggaaggtggaaaagattcgc
caagtcaaggccaagtcactctacttgcaagttgaaaagttacgtcagaacctaaacaag
ctggataacaccattagtgctgttcagcaggtcctggaggagggtcgtaccatggatatt
cttctggctcgggaccgcatgctggctcaggtgcaggagctgaagaacgttagaggcctt
ctccagccccaggaagacgacaggatcatgttcaccccccctgaccaggcattgtacatg
gccattaaatcaatgggctttgtcagcagcggggctttcgctcccttgaccaaagccacg
ggggaaggtctcaagcgtgcgctgcagggcaaggtggcctcattcactgtgattggctac
aaccacgatggggagccttgcctttcggggggtgacatgatctccgcagtggtcatgggc
ccagatggaaacctttttggggcagatgtcagcgatcagcagaacggaacctacctggtc
agctaccgtccccagctggagggagagcacctggtgtccgtgatgatgtgcaaccaacac
attgagaacagccccttcaaagtgatggtgaagtccgggcgcagctacatcggcatcggg
ctgccggggctgtccttcggcagcgagggagacagcgacggcaagctctgccgcccctgg
ggggtcagcattgacaaagaaggcttcatcattgtcgccgaccgcagtaacaaccgcatc
caggtgttcaagccatgtgggaccttccatcacaagttcggcacgctgggctcccggccg
ggccagttcgatcgtcctgccggcgtggcctgtgacatttcacgtaggatcgtcgtggcc
gacaaggacaatcatcgcatccagatcttcacgtttgaggggcagttcattctgaagttt
ggggagaaaggagcgaaaaacggtcagttcaattacccgtgggatgtggctgtcaatgca
gaaggcaagatcctggtctctgacacgaggaatcatcgcattcagctgttcgggcccgac
ggcgtgttccttaacaagtacggcttcgaaggggtactctggaagcactttgattccccc
agaggtgtgacgttcaatcacgagggtcacttggtagtgacggacttcaacaaccatcgc
ctcttggtcatccatccagattgtcagtcagcacgcttcctgggctccgagggcaccggc
aacggccagttcctgcgcccgcagggagtggcggtggatcaggaagggcgcatcatcgtg
gccgactccaggaaccaccgggtgcagatattcgagtccaatggtagctttttatgcaag
tttggcactcagggaagcggctttggtcagatggaccgtccttcaggtatagctgtcacc
cctgatggcatgattgttgtggtcgactttggaaacaatcgaattctcgtcttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system