KEGG   Taeniopygia guttata (zebra finch): 100219267Help
Entry
100219267         CDS       T01082                                 

Gene name
USP13
Definition
ubiquitin specific peptidase 13 (isopeptidase T-3)
Orthology
K11836  
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
tgu  Taeniopygia guttata (zebra finch)
Brite
Enzymes [BR:tgu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100219267 (USP13)
Peptidases [BR:tgu01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100219267 (USP13)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100219267 (USP13)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
9
AA seq 861 aa AA seqDB search
MQRAALFRAGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHMERHYRKTGQCVYLHLKRHVRQKVPGASGGALPKRRNAKLFLDLEISSD
LNSDDFEYEDEAKLVLFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQEPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCCRCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
TEHYRETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELVRAKIPFSACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDHMANHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALEWIFSHPDPEEESDPALDTMDMEN
NANANILSETGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq 2586 nt NT seq  +upstreamnt  +downstreamnt
atgcagcgggccgcgctcttccgcgccggcgatgcgcagatggccgccggggacctgggc
gagctgctcgtcccctacatgcccacgatccgcgtgcccaagtcaggggaccgggtctac
aagacggaatgtgccttctcctacgactcgcccgattcagaaggaggtctctacgtgtgc
atgaacacgttcctggggtttggaagggagcacatggagcggcattaccggaagacagga
cagtgtgtctacctgcacctgaagcgacacgtgagacagaaggtaccaggagcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacagtgatgactttgaatatgaggatgaagcaaaacttgttctctttcctgatcac
tatgaaatctcactacccaacatagaagagctaccagcactggtgacgatagcttgtgat
gcactgctcagtgcaaaatcaccctacaggaagcaggaacctgactcctgggaagaagag
ctgcaggcatctaaacatgctaaaacacttgtacagttagacaatggtgttagaattccc
cccagtggttggaagtgctgcaggtgtgacctgcgggagaacctgtggctgaacctgacg
gacggctccgtgctctgcgggaagtggttcttcgacggcagcgggggcaatgggcacgcc
acggagcactacagggagacaggctatcccctggcagtgaagctgggaaccatcactcct
gatggggcagatgtctattcctttgatgaagaggagccggttttagatccacatatagca
aaacatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggcta
agagataatgacataaagccaagagtttcggaatgggaagtgattcaggaagctggtgtg
aaactcaagcccatgtatggcccaggatacacaggcatgaagaacctggggaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaatact
cagatggctaaactgggacatggcctcctttcaggccaatactctaagccacccatgaaa
tctgagctcattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgaatgttcaaggcttttataagtaaaggccacccagaattctcctctaatagacaa
caagacgcacaggaatttttcctgcatcttataaatctagtagagaggaaccccgtgggc
tcagagaaccccagcgatgttttccggttcctggtggaggagcgcacgcagtgctgccag
tccaggaaggtgcgctacaccgagagggtggactacatcatgcagctccctgtggccatg
gaggcagctacaaacaaagatgaattaattgcctatgaattgaagaggcgagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatcccatttagtgcttgtctg
caggccttttctgaaccaagcaacgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttcccgttttgcttcctttcctgagtacttagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttctattgacatg
ccagatttcctggatatcagtcaccttcgggccagggggctccagccaggagaagaggaa
ctcccagacattgctcctcccattgtcattcctgatgatccaaaagatcacatggcgaac
catttcgtggagtccctagatattgatgaatcctcagttatgcagctggcagagatgggc
tttcctttggaagcgtgtcggaaagctgtgtactatacaggcaacctgggggctgaagtt
gctttcaactggatcattgcacacatggaagaaccagacttcgctgagccattggtcata
cctgcatttggagaagtggcttccagtggggcagctgctttaggagctgtagggttagat
aaccagcctcctgaagagatggttgcaattatcatttccatgggattccaaaggaatctg
gcgattcaggcactgaaggcaacaaacaataacttggagcgtgcactggagtggatcttc
agccaccctgaccctgaggaagaaagtgaccctgctttggacacgatggatatggagaac
aatgctaatgccaatatcctttcagagacagggtcagagggacccaggatcaaagatggc
cctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacaatgagtggt
cactacgtttgtcacctcagaaaggaaggaagatgggtgatctacaacgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggatacca
agttag

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