KEGG   Taeniopygia guttata (zebra finch): 100219382Help
Entry
100219382         CDS       T01082                                 

Gene name
CLOCK
Definition
(RefSeq) clock circadian regulator
  KO
K02223  
circadian locomoter output cycles kaput protein [EC:2.3.1.48]
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
Herpes simplex infection
Brite
KEGG Orthology (KO) [BR:tgu00001]
 Human Diseases
  Infectious diseases
   05168 Herpes simplex infection
    100219382 (CLOCK)
Enzymes [BR:tgu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.48  histone acetyltransferase
     100219382 (CLOCK)
Transcription factors [BR:tgu03000]
 Eukaryotic Type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    100219382 (CLOCK)
Chromosome [BR:tgu03036]
 Eukaryotic Type
  Histone modification proteins
   HATs (histone acetyltransferases)
    100219382 (CLOCK)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Position
4
AA seq 845 aa AA seqDB search
MSSIADRNDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMD
KSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDG
NIIYVSESITPLLEHLPSDLVDQSVFNFIPEGEHSEIYKILSSHLLESDSLTPEYLKSKN
QLEFCCHMLRGTIDPKEQPTYEYVKFIGNFKCLNHVPNSAHNGFEGTIQRSHRPSYEEKV
CFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSG
YDYYHVDDLDNLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFI
VCTHTVVSYAEVRAERRRELGIEESLPEITADKSQDSGSDNHINTVSLKEALERFDTSPT
PSASSRSSRKSSHTAVSDHSSTPTKMTVDTSTPPRQGLSGHEKTAQRRSSLSSQSLSSQS
LGQPVTQPAISQPATLQLQSGMTQPVFQFSAQLGAMQHLKDQLEQRTRMIEANIHRQQEE
LRKIQEQLQIVHGQGLQMFLQQSASGLNFGSVQLPSGNSSTVQQLTPINMQGQVVQTNQT
QSGMNTGHINTPHMIQQQPLQSTATQHNQQNVLSGHNQQSSLASQSQNTVSAPLYNTMVI
SQPTGGNVVQVPSSLPQTNNQNAAAVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAVMVP
STMFMGQVVTAYPTFAAQQQQTQTLSITQQQQQQQQQQSQQDHQQQLTTVQQPAQSQLTQ
HPQQFLQTSRLLHGNQSAQLILSAAFPLQQSTFTQSHHQQHQSQQQQLSRHRTDKMTDPS
KVQPQ
NT seq 2538 nt NT seq  +upstreamnt  +downstreamnt
atgagctccattgcagacagaaatgacggaagcatttttgatgggctggtggaagaagat
gacaaagataaagcaaaaagggtgtctagaaacaagtccgaaaagaaacgtcgagatcag
tttaatgtacttatcaaagagttgggttccatgcttccaggtaatgctcggaagatggat
aaatccactgtgctgcagaagagcattgactttttacggaagcacaaagaaattactgca
caatcagacgccagtgaaattcgacaggactggaaaccgacattccttagtaatgaagag
ttcacacagttaatgttagaggctcttgatggtttttttttagcaattatgacagatgga
aatataatatatgtgtctgaaagtataactcccttacttgaacatttgccatctgatctt
gtggatcagagtgtatttaattttatcccagagggggaacattcagaaatttataaaata
ttgtcttctcatctgctggaaagtgattccttgacaccggaatacttaaaatcaaaaaat
cagctagaattctgttgccatatgctgcgaggaacaatagatccaaaagagcagcccaca
tatgaatacgtaaaatttataggaaatttcaagtgtttgaatcatgttcccaactcagcg
cacaatggttttgaaggaactattcagagatcacaccggccttcatatgaagaaaaagtt
tgctttgtagccacagtcagattagctacacctcaatttatcaaggaaatgtgcactgtt
gaagaacccaacgaagagttcacatctagacacagcttagaatggaagttcttattcttg
gatcacagggcacctccgataataggttatcttccatttgaagttttgggaacatcaggg
tatgattattatcatgtggatgatctggataatctggcaaaatgtcatgagcatttaatg
cagtatgggaaagggaagtcatgttactacagattccttacaaagggacaacaatggatt
tggctgcaaactcattactatatcacgtatcaccagtggaattccaggccagagtttatt
gtctgtacgcacactgttgtgagttatgcagaagttagagcagaaagacgacgagaactg
ggtattgaggaatctctcccagagataacagcagataaaagtcaggactctgggtctgac
aatcacataaacacagtgagtctcaaagaagcactggaaaggtttgataccagccccaca
ccttctgcttcctccaggagttcaagaaaatcttcacatactgcagtatcggatcattca
tcaacaccaactaaaatgacagtggacactagcactcctccaaggcaaggcttatctggt
catgaaaagactgcgcaaagaagatcatctctgagcagtcagtctttaagctcacagtct
cttggacaaccagtaacacagccagcaatatctcagcctgcaactttgcagctccagtct
ggaatgactcagcctgtgtttcagttttcagctcaattgggagctatgcagcatctaaag
gaccagctagagcaaagaacacgcatgatagaggcaaatattcatcggcagcaggaagag
ttgcgtaagattcaagagcagcttcaaattgttcatggtcaaggactccagatgttcttg
cagcagtcagcttctggactcaactttggttctgtgcagcttccttctggaaattcttca
actgttcagcagcttacgccaataaacatgcaaggtcaagttgttcagactaatcagact
caaagtgggatgaacacaggccatataaatactccacacatgatacagcagcagcctttg
cagagtactgcaacacagcataatcaacaaaatgtacttagtggacacaatcaacagtct
tctcttgccagtcagtcacagaacacagtgtcagcacctttgtacaacactatggtgatt
tctcagccaacaggaggaaatgtggtgcaggttccctctagcttaccacagaccaacaac
cagaatgctgctgcagtaaccacttttacacaggacagacaaatcagattttctcaaggt
cagcaacttgtaacaaaacttgtcacggccccagtagcatgtggagcggtaatggtacca
agtactatgtttatgggacaggtggtgacagcttatcccacttttgctgcccaacagcag
cagacacagactttgtcaataacacaacagcagcagcagcagcaacagcagcaaagtcag
caggaccatcagcagcagctcaccacagtgcaacaaccagctcagtcacagctgacccag
cacccccagcagttcctacagacatccaggttacttcatgggaatcagtcggctcagctt
attctctctgctgctttcccactacaacaaagcactttcactcagtcccaccaccagcag
catcagtctcagcagcagcagctgtcacgacacagaactgacaagatgactgatccctcc
aaagttcagccacagtag

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