KEGG   Taeniopygia guttata (zebra finch): 100221289Help
Entry
100221289         CDS       T01082                                 

Gene name
THBS2
Definition
(RefSeq) thrombospondin 2
  KO
K04659  
thrombospondin 2/3/4/5
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
Phagosome
Focal adhesion
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:tgu00001]
 Environmental Information Processing
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100221289 (THBS2)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    100221289 (THBS2)
  Cellular community - eukaryotes
   04510 Focal adhesion
    100221289 (THBS2)
Membrane trafficking [BR:tgu04131]
 Endocytosis
  Phagocytosis
   Opsonins
    100221289 (THBS2)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100221289 (THBS2)
  Exosomal proteins of colorectal cancer cells
   100221289 (THBS2)
  Exosomal proteins of bladder cancer cells
   100221289 (THBS2)
Cell adhesion molecules and their ligands [BR:tgu04516]
 2. Integrin Family
  Beta1 integrins
   VLA-3
    ITGB1; integrin beta 1 [KO:K05719]
     100221289 (THBS2)
  Beta3 integrins
   alpha IIb  beta 3
    ITGB3; integrin beta 3 [KO:K06493]
     100221289 (THBS2)
   VNR
     100221289 (THBS2)
 7. Others
  SDC4; syndecan 4 [KO:K16338]
   100221289 (THBS2)
Glycosaminoglycan binding proteins [BR:tgu00536]
 Heparan sulfate/Haparin
  Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
   100221289 (THBS2)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Ensembl: 
Position
3
AA seq 1177 aa AA seqDB search
MLKRRGLLWLTVLITLWVSSNAQDGDKEEETTFDLLQVSNINRKTVGAKVFRGPDPTMPA
YRFIRFDHIPPCKPEKLKKILKLIRQNEGFILSATLRQDRQSRGTILALEGPGISERQFE
IISNGRANTLDLIYWVDGFQNVISLEDVDLADSQWKNLTVQITGENYNLYVGCDLIDSFI
LEEPFYEQLKAESSRLYVAKGSTRENHFRGLLQNIQLIFDTSIEDVLRKKGCQRSQSTEV
NTINESTEILHLSPAVTTEYVGEKPEKAEFCDRSCEELGSMFTELTGLRIVVNNLADNLQ
KVSEENQIMWELIGPNKTMKNQPVCWQDGRVFADNESWIVDSCTKCICQDSKIVCNQITC
PAVSCADPVFVEGECCPVCSHSDDSEEGWSPWSDWTKCSVTCGSGTQMRGRSCDVTRSAC
TGPHIQTRMCSFKKCDHRIRQDGGWSHWSPWSSCSVTCGVGNITRIRLCNSPIPQMGGKN
CVGNGRETEKCEKVPCPVNGQWGPWSPWSACTVTCGGGIRERSRLCNSPEPQYGGKPCVG
DTKQHDMCNKKDCPIDGCLSNPCFPGAECNSYPDGSWSCGACPAGYLGNGTFCEDLDECI
AVSDVCFKVNQVHRCVNTNPGFHCLPCPPRYKGSQPYGVGLEVAKTEKQVCEPENPCKDK
THSCHKSAECIYLGHFSDPMYKCECRTGYAGDGRICGEDSDLDGWPNNNLVCAANATYHC
VKDNCPLLPNSGQEDFDKDGKGDACDEDDDNDGVEDDKDNCPLLFNPRQFDYDKDEVGDR
CDNCPYVHNPAQIDTDNNGEGDSCAVDIDGDDIFNERDNCPYVYNTDQSDTDGDGVGDQC
DNCPLMHNPDQTDADNDLVGDQCDNNEDIDEDGHQNNQDNCPYIPNANQADHDQDGKGDA
CDPDDDNDGVPDDRDNCRLRYNPEQEDSDGDGRGDICKDDFDNDNVPDIYDVCPENNAIS
ETDFRKFQMVPLDPKGTAQIDPNWVIRHQGKELVQTANSDPGIAVGYDEFSSVDFSGTFY
VNTDRDDDYAGFVFGYQSSSRFYVLMWKQVTQTYWEDKPTRAYGYSGVSLKVVNSTTGTG
EHLRNALWHTGNTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGLIKVLVYEGKQVMV
DSGPIYDTTFAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq 3534 nt NT seq  +upstreamnt  +downstreamnt
atgctgaagaggagagggttgttgtggcttactgtcttgataaccctgtgggtttcctca
aatgctcaggatggtgacaaagaagaagagactacctttgatttacttcaagtcagtaac
ataaaccgaaagacagttggagcaaaggtgttccggggcccagaccccactatgccagca
tatcgtttcattcggtttgaccatatacctccatgtaaaccggagaagctaaaaaagatc
ctaaaactaatccggcagaatgagggctttatcctctcagccaccctgaggcaagacagg
caatctagaggcacaatccttgctttagagggtcctggcatcagtgagaggcagtttgag
atcatttccaatggccgggccaacaccctggaccttatctattgggtggatggcttccag
aacgtgatttccctggaagatgtggaccttgctgactcccagtggaagaacctcaccgtg
cagataacaggggagaactacaacctctatgttggctgtgaccttattgacagcttcatc
ctggaagagcctttctatgagcagctgaaggcagagagcagcaggctgtacgtggcaaaa
gggtctactcgggagaatcatttcaggggtcttttgcaaaatattcagttaatctttgat
acttcaatagaggatgttctgcgtaagaaaggatgccagagaagccagtcaactgaagtg
aacaccatcaatgagagcactgaaatccttcacttgagccctgcggtcacaactgagtac
gtgggtgagaaaccagagaaggcagagttctgtgaccgctcctgtgaagagctgggatcg
atgttcacagagctcactggcctgcgcatcgtggtgaacaacctggctgacaacctccaa
aaagtgtctgaagagaaccaaattatgtgggaactgattgggcctaacaaaacaatgaag
aaccaacctgtttgctggcaggatggccgtgtctttgcagataatgaaagctggattgtg
gatagctgcaccaagtgcatttgccaggattccaaaattgtgtgcaatcaaatcacctgc
ccagcagtttcctgtgctgatccagtttttgttgaaggtgaatgctgtccagtctgctct
cattctgatgacagtgaggagggctggtcaccgtggtcagactggacaaagtgctcagtt
acctgtggctctgggacacagatgcgaggaaggtcatgtgatgtcaccaggagtgcttgt
acaggcccacacatccaaacaaggatgtgcagctttaagaaatgcgatcatcgcatacgt
caagatggtggctggagtcactggtctccctggtcctcctgttcagttacctgtggagtg
ggaaatatcacccgcatccgcctctgcaattctcctattccccagatgggtgggaaaaac
tgtgtgggaaatgggcgtgaaacggagaagtgtgagaaggttccatgtccagtgaatggc
cagtggggtccttggtctccatggtctgcctgcactgtcacctgtggaggaggaattcgt
gagaggtctcggctctgtaacagtccagagccacagtatggaggaaagccctgtgtggga
gataccaagcaacatgatatgtgcaataagaaggattgcccgattgatgggtgtttgtca
aatccttgctttcctggagcagaatgcaacagctacccagatgggtcttggtcatgtggg
gcatgcccagcaggataccttggcaatggtaccttctgcgaggatcttgatgagtgtata
gctgtgtcagatgtttgctttaaagtgaatcaggtccatcgctgtgtgaacacaaatccg
ggtttccactgcttgccgtgtcctccacgctataaaggaagtcagccctatggagtaggg
cttgaagttgccaagacagagaagcaagtctgtgaacctgagaatccgtgcaaggacaag
acacacagctgccacaagtctgcagagtgcatctatctgggccatttcagtgatccaatg
tacaaatgtgaatgtagaacaggttatgctggtgatggacgcatctgtggtgaggattca
gatttggatggctggcctaataataacttggtctgtgctgctaatgcaacgtaccactgt
gtgaaggataactgcccccttctgcctaactctggccaagaagactttgacaaagatggc
aaaggagatgcctgtgatgaggatgatgacaatgatggtgttgaagatgacaaagacaat
tgccctcttctgttcaaccctcgccagtttgattatgacaaggatgaagttggtgaccgc
tgtgacaattgtccctatgtgcacaaccctgctcagattgacacagacaacaatggggaa
ggagactcatgtgctgtggacattgatggagatgacatttttaatgaacgggataattgc
ccttacgtctacaacacagaccagagtgatacagatggtgatggagttggtgatcagtgt
gataattgtccattgatgcataatccagaccagactgatgcagataatgaccttgttggt
gaccagtgtgacaataatgaggacatagatgaagatggccaccagaacaaccaggataac
tgcccttacatccccaacgctaaccaggctgaccacgatcaggatggtaaaggagatgcc
tgtgatcctgatgatgacaatgatggtgtcccagatgacagggacaattgccgcctcaga
tacaaccctgagcaggaagactcagatggtgatgggagaggtgatatttgcaaagatgac
tttgacaatgacaatgttccagatatctatgatgtgtgccctgaaaacaatgccattagt
gaaactgatttcagaaagttccagatggtccctctggaccccaagggaacggctcagatt
gatcccaactgggttattcgccaccaaggcaaggaactggtacagactgctaactctgat
cctggaatagctgtaggctacgatgagttcagctctgttgacttcagcgggacattctat
gttaacacagaccgcgatgatgactatgctggctttgtctttggctaccagtccagcagt
cggttttatgttctgatgtggaagcaggtcactcagacctattgggaggacaaacccacc
agggcttacggctattctggtgtgtcgctcaaagtagtgaattcaacaacgggtactggt
gagcacttaagaaatgctctctggcacacaggaaacacccctggacaggtgcgtactttg
tggcatgatcccaagaacattggctggaaagattatactgcttacaggtggcacttaatt
cataggcctaaaacaggattaataaaagttctggtttatgaagggaaacaagtcatggtg
gattctggaccaatctatgatacaacttttgctggtggacgattaggtctttttgtcttc
tctcaagagatggtctatttctctgacctcaaatatgaatgcagagatgcttga

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