KEGG   Taeniopygia guttata (zebra finch): 100221879
Entry
100221879         CDS       T01082                                 
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
  KO
K05699  actinin alpha 1/4
Organism
tgu  Taeniopygia guttata (zebra finch)
Pathway
tgu04510  Focal adhesion
tgu04520  Adherens junction
tgu04530  Tight junction
tgu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:tgu00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100221879 (ACTN1)
   04520 Adherens junction
    100221879 (ACTN1)
   04530 Tight junction
    100221879 (ACTN1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100221879 (ACTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tgu04131]
    100221879 (ACTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tgu04812]
    100221879 (ACTN1)
   04147 Exosome [BR:tgu04147]
    100221879 (ACTN1)
Membrane trafficking [BR:tgu04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100221879 (ACTN1)
Cytoskeleton proteins [BR:tgu04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     100221879 (ACTN1)
Exosome [BR:tgu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100221879 (ACTN1)
  Exosomal proteins of colorectal cancer cells
   100221879 (ACTN1)
  Exosomal proteins of bladder cancer cells
   100221879 (ACTN1)
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_8 EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_5 XisI Uds1 U3_assoc_6
Other DBs
NCBI-GeneID: 100221879
NCBI-ProteinID: XP_030130332
Ensembl: ENSTGUG00000011477
Position
5:28774376..28860362
AA seq 914 aa
MDHYDAQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKM
VSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGKEAMLQQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPHEI
NGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDAQKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRLGVVTFQAFIDFMSR
ETADTDTADQVMASFKILAGDKNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALD
YMSFSTALYGESDL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atggatcactacgacgcgcagcagaccaatgactacatgcagccggaggaggactgggac
cgggacctgctcctcgacccagcttgggagaagcagcagaggaagacatttacagcatgg
tgtaattctcacctccgcaaggctgggacacagattgagaacatagaggaagatttcagg
gatggtcttaaactcatgttacttctggaagtcatttcaggtgaacgtctggctaagcct
gaaagaggcaaaatgcgagtgcacaaaatatccaatgtgaacaaggccttggatttcatt
gccagcaaaggagtcaagctagtatccattggagcagaagaaatcgtggatggcaatgtt
aaaatgacccttggaatgatctggaccatcatccttcgttttgccattcaggatatttca
gttgaagaaacatctgctaaagaaggacttttgttatggtgtcagcggaagacagccccc
tacaaaaatgtaaacatccagaacttccatatcagttggaaggatggccttggtttctgt
gctttaattcatagacaccgtccagagctcatcgactacgggaagctacgaaaggatgat
cctctcactaatctaaacacagcttttgatgtggctgagaaatatctggatattccgaag
atgctggatgcagaagacattgttggaactgcccgtcctgacgagaaggccatcatgacc
tatgtttctagcttctaccacgccttctcaggagcccagaaggcggagacagcagcaaat
cggatctgcaaggtgctggcagtcaaccaagaaaatgaacagctcatggaagactacgaa
aaactggccagtgatctgctggagtggattcgtcgcaccatcccctggctggagaaccgg
gccccagagaacaccatgcaggccatgcagcagaagctggaggacttccgggactaccgc
cgcctgcacaagccccccaaggtccaggagaagtgccaacttgagatcaattttaacacc
ttgcagaccaagctgcggctcagcaataggccagccttcatgccctccgaagggaaaatg
gtctcggatataaacaatgcctggggtggcctagagcaggctgagaagggctacgaggag
tggttattgaatgagatccggaggctagagaggctggatcacctggcagagaagttccgg
cagaaggcatccattcatgagtcctggacagatggaaaggaagcaatgctgcagcagaag
gattacgaaactgctaccctctcggagataaaggccctgctgaagaaacacgaggccttt
gagagtgacctggctgcacaccaggaccgcgtggaacagattgctgctattgcacaagag
ctcaatgagctggactattacgactctcccagtgtcaatgccaggtgccagaagatctgt
gatcagtgggataatctgggtgccctaacccagaaacgtagagaagccttggagaggaca
gagaaactactggaaacaattgaccagttgtacctggagtatgccaaacgagctgcccct
ttcaataactggatggaaggggccatggaagatctgcaggacacattcatcgttcacacc
attgaggagatccagggattgaccacagctcatgagcaattcaaagccacgttgccagat
gcggacaaggagcgacaagccatcttgggaatccacaatgaagtctcaaagattgtccag
acatatcatgtcaacatggcaggaactaatccttacactacaatcaccccacatgagatc
aatggcaaatgggaacatgtgcggcagctggtgcccagaagggatcaagccctgatggaa
gaacacgctcgccagcagcaaaatgaacgacttcgtaaacagtttggtgcacaggccaat
gtcattgggccctggatccagaccaagatggaggagattggccgcatttcaatagagatg
cacgggaccctggaggaccagcttaaccacttgcggcagtacgagaaaagcattgtgaat
tacaaaccaaagattgaccagctggaaggagaccatcagctgatccaggaagcccttatc
tttgacaacaagcacaccaactacaccatggagcatatccgcgtgggctgggagcagtta
ctaacaacaattgctagaaccatcaacgaagtggaaaaccagatcctgacccgtgatgcc
aaaggaatcagccaggaacagatgaatgagttccgggcttctttcaaccactttgacagg
gaccactccggcacacttggccctgaggaattcaaagcctgtctcatcagcttgggttac
gatattggaaacgatgcacagaagaagactggtatgatggattgtgaagatttccgagcc
tgccttatctccatgggttacaatatgggagaggcagagtttgcccgcatcatgagcatc
gtcgacccaaaccgtttgggtgtagtgaccttccaggccttcatcgacttcatgtcccgg
gagacagcagatacagatactgctgaccaggttatggcttccttcaagatcctggctgga
gataagaactacatcactgtggatgaattgcggcgggagctgcctcctgaccaggctgaa
tattgcattgctaggatggcaccctacaatggccgtgatgctgtacccggtgccctggac
tacatgtccttctccacagcgctctacggcgaaagtgacctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (11)   
   Pfam (11)   
All databases (65)   

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